Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01237 ATGGCTGTTTGGGTGAACATGTTACCTTATTGTATGGCGTTTCTTCTTCTATTTTTTTCCATGTTTAGATCCGGAGCAAAGGTTGTTACTATTGATGTGCGAGCAGCCAAGAATCTCATCCAAACCGATCACATTTATCTTGATGTTAGGACGGTGGAAGAGTTTGCGAAAGGGCATGTAGATGCAGCTAAGATCATTAACATTCCATACATGTTGGATACACCTAAGGGCAGGGTGAAGAACCCAAATTTTCTAAAGGAGATTTCATCCGTTTGCGATAAAGAAGATCATCTCGTTGTGGGTTGCCAAAGTGGGGTTAGATCTTTGTATGCAACTTCTGATCTTCAATCTGATGGTTTTAAGAATGTGAAGGACATGGGAGGAGGTTATGTAGACTGGGTTAGAAACAAGTTTCCAATTAATACATCAGTAGCCAAAGAAGAACTGTAA 450 0.4 MAVWVNMLPYCMAFLLLFFSMFRSGAKVVTIDVRAAKNLIQTDHIYLDVRTVEEFAKGHVDAAKIINIPYMLDTPKGRVKNPNFLKEISSVCDKEDHLVVGCQSGVRSLYATSDLQSDGFKNVKDMGGGYVDWVRNKFPINTSVAKEEL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01237 149 SMART rhod_4 31 139 IPR001763 -
Trre10g01237 149 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 27 140 IPR036873 -
Trre10g01237 149 CDD RHOD 35 134 - -
Trre10g01237 149 ProSiteProfiles Rhodanese domain profile. 40 142 IPR001763 -
Trre10g01237 149 Pfam Rhodanese-like domain 37 135 IPR001763 -
Trre10g01237 149 Gene3D - 21 141 IPR036873 -
Trre10g01237 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 23 144 IPR044684 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01237 Trre-Chr10 10188150 10189242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01237 27 142 Sulfurtransferasese or Rhodanese AT5G66170 57.759 6.79e-50 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01237 - K15692 gmx:100815122 228.024