Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01236 ATGGCTGTTTTGATGAATTTGTTACCTCGTTGTTTGGTTCTTCTTCTTTTATTTGTCTTATGTGCCTTAGGCGCAAAGGTTGTGACTATTAATGTACGAGAAGCCAAAAATCTCATCCAAACCGGTCACATTTATCTTGATGTTAGGACGGTGCAAGAGTTTGTGAAAGGGCCTCGTGTGATTTCATCTAAGATAATCAATATTCCATACATGTTGGATACACCCAAGGGCAAGGTGAAGAACCTATATTTTCTAAAGGAGTGTTCATCTCTTTGTGACAAAGAAGACCATCTCGTTGTGGGCTGTCAATTTGGACTGAGATCTCTACATGCAGCTTCTGATCTTCTAGATGATGGTTTTAAGAATGTAAAGCACATGGACGGAGGTTATGCAGAATGGATTAGAAACATGTTTCCAATAAGTAACCACAGTGGTCGATCTTCTTCAGGATTAGGGCCATGA 462 0.3983 MAVLMNLLPRCLVLLLLFVLCALGAKVVTINVREAKNLIQTGHIYLDVRTVQEFVKGPRVISSKIINIPYMLDTPKGKVKNLYFLKECSSLCDKEDHLVVGCQFGLRSLHAASDLLDDGFKNVKHMDGGYAEWIRNMFPISNHSGRSSSGLGP 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01236 153 PANTHER THIOSULFATE SULFURTRANSFERASE 18 24 142 IPR044684 GO:0003824
Trre10g01236 153 SMART rhod_4 30 139 IPR001763 -
Trre10g01236 153 ProSiteProfiles Rhodanese domain profile. 39 142 IPR001763 -
Trre10g01236 153 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 26 140 IPR036873 -
Trre10g01236 153 Pfam Rhodanese-like domain 33 135 IPR001763 -
Trre10g01236 153 CDD RHOD 34 133 - -
Trre10g01236 153 Gene3D - 22 141 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01236 Trre-Chr10 10171016 10172726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01236 26 149 Sulfurtransferasese or Rhodanese AT5G66170 47.581 1.54e-39 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01236 - K15692 tpra:123909686 187.963