Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01235 ATGGCTGTTTCAACCAAATTGTTACCACGTTGTTTGGCGTTTCTTCTTATCTTGTCTATTTCAAGAGCAAACATTCTAACTATTGATGTACAAGAAGCCAAAAATCTCATCCAAAACGGTTACATTTATCTTGATGTTAGGACGGTGGAAGAGTTTGTGAAAGGGCATGTGGATGCAGCTAAGATTATTAATATACCATACATGTTGGATACACCCAAGGGTAAGGTGAAGAACCCATACTTTTTAAAGGAGGTTTCATCTGCTTATAAGAAAAAAGCTCATCTCGTTGTGGGTTGTCAAATTGGGGTGAGATCTCAGAAAGCAACTTTAGATCTTCTAGCTGATGGTTTTAAGAATGTGAAGGCCATGGGAGGAGGTTATGTGGAATGGGTAAGAAACAAGTTTCCAGTGATTACAATGGTAGATCTTCTTGGATAA 438 0.3813 MAVSTKLLPRCLAFLLILSISRANILTIDVQEAKNLIQNGYIYLDVRTVEEFVKGHVDAAKIINIPYMLDTPKGKVKNPYFLKEVSSAYKKKAHLVVGCQIGVRSQKATLDLLADGFKNVKAMGGGYVEWVRNKFPVITMVDLLG 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01235 145 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 23 138 IPR036873 -
Trre10g01235 145 PANTHER THIOSULFATE SULFURTRANSFERASE 18 21 137 IPR044684 GO:0003824
Trre10g01235 145 Pfam Rhodanese-like domain 31 132 IPR001763 -
Trre10g01235 145 SMART rhod_4 28 136 IPR001763 -
Trre10g01235 145 CDD RHOD 32 131 - -
Trre10g01235 145 Gene3D - 18 137 IPR036873 -
Trre10g01235 145 ProSiteProfiles Rhodanese domain profile. 37 139 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01235 Trre-Chr10 10164469 10167173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01235 19 139 Sulfurtransferasese or Rhodanese AT5G66170 52.066 4.38e-45 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01235 - K15692 gmx:100815122 189.889