Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01234 ATGTTATTATTCCCTAATAATCTTGTTGGTGAAAAATGGCTAGGATTTGTGACAGCCATATGGGTACAAGCAATATGTGGAAACAATTATACATTTGCAAATTATTCTGATGTGTTAAAGTCTCTAATGGCTTTGACTCAAATGCAGCTTAATAATCTATCTGTTGCTAAAGATGTTGGTAAAGCTTTTGGTATTTTATCAGGTCTTGTTTCTGATCGTTGGCCAACTTCAGTTATTCTTATGATTGGTGCTGTTTTGGGATTCATTGGCTATGGTGTTCAATGGCTTGTTGTTAGCCAAAGAATAGCTCCACTTCCTTATTGGATGATGTGTATATTCTTATGTATGGGAGGAAACAGCTCAACATGGATGAACACAGCAGTACTTGTAACTTGCATGAGAAACTTTTCAAAAAACCGCGGTCCAATTTCCGGAATTCTAAAAGGTTATGTAGGACTCAGCACAGCAATCTTTACTGATATATGCACAGCTTTATTTTCCTCAGACCCATCAAAATTCCTCTTAATGCTCACAATTGTTCCTGCTGTCATTTGTTTCATTGCTGCTATTTTCCTTCATGAAACTCCACCAGCTTCAACTTCAACAGAAGAAAACCAAGAGACAAAATTCTTCAATGTGTTTAACTTGATTGCAGTTACAGTAGCTGTTTATCTCCTAGCATTTGATATCACTGGTCCTCATAAACATGTTATTTCATTGATTTTCACAATAGGACTTTTGATCCTATTAGCTATGCCACTTCTTGTTCCTATATATTTAGCTATCTTCAAAACTAGTCCTTGTATTGACAAAGAAAAACAGATTCATGAACCATTGTTAGCAGAAAAGATTGAAAAGGAAAAGGTAAAGGAGGAGATATGTAACAAGGTGGAGGAAGATGAGATTAAGCGAAAACCGGTGTTAGGAGAAGAGCATACTATCATTGAAATGGCGAAAACTGTTGATTTTTGGGTTTTGTTTGTGTCATTTCTATGTGGTGTGGGAACAGGACTATGTGTTATGAATAATATGGGACAAATGGGATTAGCACTTGGTTACCATGATGTTTCTTTGTTCATTTCATTCATTAGCATTTGGGGTTTCTTCGGACGGATTCTTTCCGGTTCGCTCTCTGAATACTACATCAGAAAATCAGGCATGCCAAGGCTAGTATGGAATGCAGCTTCTCAAATTCTGATGTTTTTCGGATACATAGCATTAGCTATGGCCTTACCAGGATCACTCTACATTGGATCAATGTTAGTAGGAATATGTTACGGAGTTCGTCTTACAATAACACCAGCAGCAGCTTCAGAACTATTTGGTCTAAAATACTATGGTTTAGTATACAACATTCTCATTCTCAATCTTCCTATTGGTTCATTCCTATTTTCTGGTCTCATTGCTGGTTATCTTTATGATATTGAAGCCACTAGTGTTCCAGGAGGTGGAAACACTTGCACTGGAGCACATTGTTTCATGCTTGTTTATTTGATTATGGCTTTTGCTTGTGTCTTGGGGTGTGGATTGGATTTGTTGCTTGCAGTTAGAACAAAGAAGTTATATTCCAAGATACATGTAGAGAGAAATCTTGTCAATTCCCAGGTTCAACATTGA 1617 0.3692 MLLFPNNLVGEKWLGFVTAIWVQAICGNNYTFANYSDVLKSLMALTQMQLNNLSVAKDVGKAFGILSGLVSDRWPTSVILMIGAVLGFIGYGVQWLVVSQRIAPLPYWMMCIFLCMGGNSSTWMNTAVLVTCMRNFSKNRGPISGILKGYVGLSTAIFTDICTALFSSDPSKFLLMLTIVPAVICFIAAIFLHETPPASTSTEENQETKFFNVFNLIAVTVAVYLLAFDITGPHKHVISLIFTIGLLILLAMPLLVPIYLAIFKTSPCIDKEKQIHEPLLAEKIEKEKVKEEICNKVEEDEIKRKPVLGEEHTIIEMAKTVDFWVLFVSFLCGVGTGLCVMNNMGQMGLALGYHDVSLFISFISIWGFFGRILSGSLSEYYIRKSGMPRLVWNAASQILMFFGYIALAMALPGSLYIGSMLVGICYGVRLTITPAAASELFGLKYYGLVYNILILNLPIGSFLFSGLIAGYLYDIEATSVPGGGNTCTGAHCFMLVYLIMAFACVLGCGLDLLLAVRTKKLYSKIHVERNLVNSQVQH 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01234 538 SUPERFAMILY MFS general substrate transporter 29 520 IPR036259 -
Trre10g01234 538 Pfam Nodulin-like 12 258 IPR010658 -
Trre10g01234 538 CDD MFS_Mch1p_like 12 508 - -
Trre10g01234 538 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 523 - -
Trre10g01234 538 Gene3D MFS general substrate transporter like domains 13 509 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01234 Trre-Chr10 10159021 10161682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01234 12 534 Nodulin-like Gene Family AT4G34950 64.051 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01234 - - cit:102624072 766.918