Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01206 ATGTTTCTTCTTCTTCAACCTAGAGTAAACAAGCCGCCGTATCACTGTATCAGCAGACAACAAAACCTAAGAATACTCCATAACCAAAAAATTCAAGCTTCCATAACTCTACCAAATTCAACATGGATATTGAAAGAACTTACGGGCCATGAAAATGTGGTTCAATTCTATAATGCTTTTGAGGATAACTCATATGTGTACATAGTTATGGAGTTATGCGAAGACGGAGAACTTCTAGACCGGATATTGGGCAAGAAGGACAGCCGTTATACTGAAAAAGATGCTGCAGTGGTTGTATGGCAGATGCTGAAGGTTGCAGCTGAGTGTCATTTACATGGCTTGGTACATCGCGACATGAAGCCAGAGGTGTGTTCAAAATATTAG 384 0.401 MFLLLQPRVNKPPYHCISRQQNLRILHNQKIQASITLPNSTWILKELTGHENVVQFYNAFEDNSYVYIVMELCEDGELLDRILGKKDSRYTEKDAAVVVWQMLKVAAECHLHGLVHRDMKPEVCSKY 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01206 127 Gene3D Transferase(Phosphotransferase) domain 1 38 122 - -
Trre10g01206 127 Gene3D Phosphorylase Kinase; domain 1 55 72 - -
Trre10g01206 127 PANTHER SERINE/THREONINE-PROTEIN KINASE 36 122 - -
Trre10g01206 127 ProSiteProfiles Protein kinase domain profile. 1 127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g01206 127 Pfam Protein kinase domain 36 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g01206 127 SUPERFAMILY Protein kinase-like (PK-like) 41 122 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01206 Trre-Chr10 9822625 9823962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01206 14 122 EF-hand Containing Proteins AT5G66210 62.931 1.71e-43 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre10g01206 Pkinase 3.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01206 K13412 - gmx:100817249 153.68