Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01150 ATGGGTTGTGGAAGTGGTCATTGTGTGGAGTTGTCATTGTGCTCAGCTGCCAAGGGGATCAATTCTCAAAGGGGTTCTATTGAGACAAAATTGATTGAAGCATCTGCGCAGCATAATGACTCTAATAGAGAGAAAAAAGATGGTTATATGAAGGAGACAATTCAAAAGTTGGTAGATCTGCTGTCTAAAGTTTACATTAGACAGTGCTTATGTCAGGAAGCGCTGTCTAAAACATCTTGCCCTGGAATGCAATTGGGTTTGTACGCGCTTGATTTGGCGGTGGCTCATTTGCTTCATTGCTTTAGTTGGGAGTTGCCAGATGGAATGATACCGAGTGAAATGGATGTGAGTGATGTTTTTGGCCTCACTGCTCCTAGAGCGATTCGACTCGTCACTATTCCTACGAAGCGTGTCATGTGCCCTTTGGATTAG 432 0.4375 MGCGSGHCVELSLCSAAKGINSQRGSIETKLIEASAQHNDSNREKKDGYMKETIQKLVDLLSKVYIRQCLCQEALSKTSCPGMQLGLYALDLAVAHLLHCFSWELPDGMIPSEMDVSDVFGLTAPRAIRLVTIPTKRVMCPLD 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01150 143 SUPERFAMILY Cytochrome P450 79 135 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01150 143 Gene3D Cytochrome P450 75 130 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01150 143 PANTHER CYTOCHROME P450 84A1-RELATED 77 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01150 Trre-Chr10 9221200 9225457 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01150 77 142 Monolignol Biosynthesis Gene Families AT4G36220 72.727 1.49e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01150 K09755 - qsu:112033590 122.094