Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01136 ATGCATGAATACATCACCCCCGGCCTTTCTACAAAGAAGATTATTGATCAGTATCAGAAGACTTTGGGAGATATTGATCTATGGCGTTCACACTATGAGAAAATGCTTGAAAACTTGAAGAAACTGAAAGATATTAACCATAAACTTAGAAGACAAATCAGGCATAGAATAGGTGAAGGTGGTATGGAATTGGAGGAGCTGAGCTTCCAGCAACTTCGCAGTCTTGAAGAAGATATGAATTCTTCCATTGCAAAAATACGTGAGAGGAAGTTCCATGTGATCAAAACTAGGACTGATACCTGTAGGAAAAAGGTTAGAAGCTTGGAGCAAATGAATGGAAATCTCCTTCTAGAACTTGAAAAGTGTGTGATCCATCCACAATTTCTTTTCCACGACGAAGGAGACGAGGAATCGGCTGTTGCATTGGCCAATGGTGCTTCTACACTGTATGCATTCTGTCAGCATCATTCTCATATGAATCTTGCTCATCATCATGGAGGAGATGAAGGTTTCAAGAACGACGATCTGCGCCTTGGTTGA 540 0.4074 MHEYITPGLSTKKIIDQYQKTLGDIDLWRSHYEKMLENLKKLKDINHKLRRQIRHRIGEGGMELEELSFQQLRSLEEDMNSSIAKIRERKFHVIKTRTDTCRKKVRSLEQMNGNLLLELEKCVIHPQFLFHDEGDEESAVALANGASTLYAFCQHHSHMNLAHHHGGDEGFKNDDLRLG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01136 179 Pfam K-box region 30 119 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre10g01136 179 Coils Coil 32 52 - -
Trre10g01136 179 ProSiteProfiles K-box domain profile. 32 125 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01136 Trre-Chr10 9090544 9092179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01136 1 166 MADS-box Gene Family AT3G54340 38.323 5.84e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01136 K09264 - gmx:100784496 291.582