Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01129 ATGAAGAAGAAGAAGGAGAAAAATGGAAATAAAATACCAAAAGGAAATTCAGGTTGGCCTTTAATTGGAGAGACACTTGAGTTCATTGCTTCTGGCTATTCTTCTCAACCTGTCATCTTCATGGAAAATCGCAAGTCTATTTATGGGAGTGTGTTTAAGACAAATATTTTGGGAAGCAATGTGATAATTTCAACAGATCCAGAAGTAAACAAAGTTATTCTGCAGAATCAAAGGAACATATTTGTCCCAGCTTATCCAAAATCAATTAGAGAATTAATGGGAGAACACTCAATACTCCAATTGAATGGAAACATGCATAAGAAACTTCATTCACTCATTGCAGTGTTTCTTAAATCCCCACAATTTAAAGCTCAAATCACCAAAGATATTCAACATTCTGTCAAACAGTGCTTAGCTTATTGGTCCAACAAAACAATATACTTTCAAGATGAAGTCAAAAAGATTACATTTACTATTTTGATTAAAGTTTTGATGAGCATTGGTCCTGGTGAAGATTTGGATTTGTTGAAAAGAGAATTTGGAGAATACATCAAAGGCTTGATTTGCTTACCCATCAAGTTTCCAGGAACAACACTATACAAATCCTTAAAGGCTAAGGAAAGGATGATGAAGATGGTGAGAAGGATAGTAGAGGAGAGAATGAAGCAAATTAATGATAATAATGCAGAAGATCATTGTGCAGTGAATGATGTGGTGGATGCATTGTTAAGGGATAAGAGCGAGTTATACAACTCCAGCTCAAGTTCAAGCTTAATGGTGGAAATGATTAGCCAAAACATCATAGAGTTTATGATCCCAGGAGAAGAGACCCTTCCTACAGCCATGACATTGGCCCTCAAATTTCTCTCGGACTCTCCTCTCGCTCTATCGAGACTTATGGAGGAGAACATGGAATTGAAGAAGCGGAAGACTAATTGCTCAGATGATTATACATGGTCTGATTACATGTCACTGCCATTTACTCAAAATGTCATCAGTGAAACTCTTAGAATGGCCAATATAGTGAATGGAATTTGGAGGAAAGCAGTCAAAGACGTCGAAATCAAAGGGTACCTAATTCCAAAAGACTGGTGTGTTATGGCATCTCTTACCTCAGTTCACATGGATGAAAAGAACTACGAAAACCCTTTTAAGTTTGATCCATGGAGATGGGAGAAAATTGGTGTTGTGGCTAGTAATAACTGCTTTACCCCATTTGGGAGTGGACATAGACTATGTCCTGGGTTAGAACTTTCAAGGCTAGAACTCTCTATTTTCCTTCACCATCTTGTTACTACATACAGATGGGTGGCTGAGAGAGATGAAATAATATACTTTCCAACTGTTAAGATGAAGAAAAAGCTCCCAATTAGAGTGCAACCAATTAATGCTTGA 1395 0.372 MKKKKEKNGNKIPKGNSGWPLIGETLEFIASGYSSQPVIFMENRKSIYGSVFKTNILGSNVIISTDPEVNKVILQNQRNIFVPAYPKSIRELMGEHSILQLNGNMHKKLHSLIAVFLKSPQFKAQITKDIQHSVKQCLAYWSNKTIYFQDEVKKITFTILIKVLMSIGPGEDLDLLKREFGEYIKGLICLPIKFPGTTLYKSLKAKERMMKMVRRIVEERMKQINDNNAEDHCAVNDVVDALLRDKSELYNSSSSSSLMVEMISQNIIEFMIPGEETLPTAMTLALKFLSDSPLALSRLMEENMELKKRKTNCSDDYTWSDYMSLPFTQNVISETLRMANIVNGIWRKAVKDVEIKGYLIPKDWCVMASLTSVHMDEKNYENPFKFDPWRWEKIGVVASNNCFTPFGSGHRLCPGLELSRLELSIFLHHLVTTYRWVAERDEIIYFPTVKMKKKLPIRVQPINA 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01129 464 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01129 464 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01129 464 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01129 464 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01129 464 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 2 462 - -
Trre10g01129 464 Coils Coil 296 316 - -
Trre10g01129 464 PRINTS E-class P450 group IV signature 39 62 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01129 464 PRINTS E-class P450 group IV signature 374 392 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01129 464 PRINTS E-class P450 group IV signature 397 413 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01129 464 PRINTS E-class P450 group IV signature 413 431 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01129 464 PRINTS E-class P450 group IV signature 325 341 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01129 464 Gene3D Cytochrome P450 1 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01129 464 Pfam Cytochrome P450 13 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01129 464 CDD CYP90-like 44 461 - -
Trre10g01129 464 PANTHER CYTOCHROME P450 26 11 444 - -
Trre10g01129 464 SUPERFAMILY Cytochrome P450 11 461 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01129 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01129 Trre-Chr10 9047626 9051722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01129 6 435 Cytochrome P450 AT3G13730 51.044 4.11e-164 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01129 K12637 - gmx:100799030 751.51