Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01128 ATGGAATGGTTTATAGGTGTATGTGTGAGCATAATTGTTTTGTTAATAAGTTTTTGGTGGTTTGTGATGAAGAAGAAGAAGGAGAAAAATGGAAATAAAATACCAAAAGGAAATTCAGGTTGGCCTTTAATTGGAGAGACACTTGAGTTCATTGCTTCTGGCTATTCTTCTCAACCTGTCATCTTCATGGAAAATCGCAAGTCTATTTATGGGAGTGTGTTTAAGACAAATATTTTGGGAAGCAATGTGATAATTTCAACAGATCCAGAAGTAAACAAAGTTATTCTGCAGAATCAAAGGAACATATTTGTCCCAGCTTATCCAAAATCAATTAGAGAATTAATGGGAGAACACTCAATACTCCAATTGAATGGAAACATGCATAAGAAACTTCATTCACTCATTGCAGTGTTTCTTAAATCCCCACAATTTAAAGCTCAAATCACCAAAGATATTCAACATTCTGTCAAACAGTGCTTAGCTTATTGGTCCAACAAAACAATATACTTTCAAGATGAAGTCAAAAAGATTACATTTACTATTTTGATTAAAGTTTTGATGAGCATTGGTCCTGGTGAAGATTTGGATTTGTTGAAAAGAGAATTTGGAGAATACATCAAAGGCTTGATTTGCTTACCCATCAAGTTTCCAGGAACAACACTATACAAATCCTTAAAGGCTAAGGAAAGGATGATGAAGATGGTGAGAAGGATAGTAGAGGAGAGAATGAAGCAAATTAATGATAATAATGCAGAAGATCATTGTGCAGTGAATGATGTGGTGGATGCATTGTTAAGGGATAAGAGCGAGTTATACAACTCCAGCTCAAGTTCAAGCTTAATGGTGGAAATGATTAGCCAAAACATCATAGAGTTTATGATCCCAGGAGAAGAGACCCTTCCTACAGCCATGACATTGGCCCTCAAATTTCTCTCGGACTCTCCTCTCGCTCTATCGAGACTTATGGAGGAGAACATGGAATTGAAGAAGCGGAAGACTAATTGCTCAGATGATTATACATGGTCTGATTACATGTCACTGCCATTTACTCAAAATGTCATCAGTGAAACTCTTAGAATGGCCAATATAGTGAATGGAATTTGGAGGAAAGCAGTCAAAGACGTCGAAATCAAAGGGTACCTAATTCCAAAAGACTGGTGTGTTATGGCATCTCTTACCTCAGTTCACATGGATGAAAAGAACTACGAAAACCCTTTTAAGTTTGATCCATGGAGATGGGAGAAAATTGGTGTTGTGGCTAGTAATAACTGCTTTACCCCATTTGGGAGTGGACATAGACTATGTCCTGGGTTAGAACTTTCAAGGCTAGAACTCTCTATTTTCCTTCACCATCTTGTTACTACATACAGATGGGTGGCTGAGAGAGATGAAATAATATACTTTCCAACTGTTAAGATGAAGAAAAAGCTCCCAATTAGAGTGCAACCAATTAATGCTTGA 1461 0.3696 MEWFIGVCVSIIVLLISFWWFVMKKKKEKNGNKIPKGNSGWPLIGETLEFIASGYSSQPVIFMENRKSIYGSVFKTNILGSNVIISTDPEVNKVILQNQRNIFVPAYPKSIRELMGEHSILQLNGNMHKKLHSLIAVFLKSPQFKAQITKDIQHSVKQCLAYWSNKTIYFQDEVKKITFTILIKVLMSIGPGEDLDLLKREFGEYIKGLICLPIKFPGTTLYKSLKAKERMMKMVRRIVEERMKQINDNNAEDHCAVNDVVDALLRDKSELYNSSSSSSLMVEMISQNIIEFMIPGEETLPTAMTLALKFLSDSPLALSRLMEENMELKKRKTNCSDDYTWSDYMSLPFTQNVISETLRMANIVNGIWRKAVKDVEIKGYLIPKDWCVMASLTSVHMDEKNYENPFKFDPWRWEKIGVVASNNCFTPFGSGHRLCPGLELSRLELSIFLHHLVTTYRWVAERDEIIYFPTVKMKKKLPIRVQPINA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01128 486 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01128 486 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01128 486 PRINTS P450 superfamily signature 295 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01128 486 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01128 486 Coils Coil 318 338 - -
Trre10g01128 486 PRINTS E-class P450 group IV signature 61 84 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01128 486 PRINTS E-class P450 group IV signature 435 453 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01128 486 PRINTS E-class P450 group IV signature 396 414 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01128 486 PRINTS E-class P450 group IV signature 419 435 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01128 486 PRINTS E-class P450 group IV signature 347 363 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01128 486 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 24 484 - -
Trre10g01128 486 CDD CYP90-like 66 483 - -
Trre10g01128 486 SUPERFAMILY Cytochrome P450 33 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01128 486 Pfam Cytochrome P450 35 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01128 486 Gene3D Cytochrome P450 22 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01128 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Trre10g01128 486 PANTHER CYTOCHROME P450 26 32 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01128 Trre-Chr10 9047626 9051788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01128 28 457 Cytochrome P450 AT3G13730 51.044 3.01e-163 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01128 K12637 - gmx:100799030 773.467