Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01120 ATGGGAGAACACTCAATACTCCAATTGAATGGTAACATGCATAAGAAACTGCATTCACTCGTTGCAGTGTTTCTTAAATCTCCACAATTTAAAGCTCAAATCACCAAAGATATTCAAAATTCTGTCAAACAGTGCTTAGCTTCTTGGACCAACAAATCAATATACTTTCAAGATGAAGTCAAAAAGATTACATTTACTATTTTGATTAAAGTTTTGATGAGCATTGGTCCTGGTGATGATTTGGATTTGTTGAAAAGAGAATTTGGAGAATACATCAAAGGCTTGATTTGCTTACCCATCAAGTTTCCCGGAACAACACTATACAAATCCTTAAAGGCTAAGGAAAGGATGATGAAGATGGTGAGGAGGATAGTAGAGGAGAGAATGAAGAAAATTAATGATAATAATGCAGAAGATCATTGTGCAGTGAATGATGTGGTGGATGCATTGTTAAGGGATAAGAGTGAGTTATACAACTCTAGCTCAAGTTCAAGACTAATGGTGGAAATGATTAGCCAAAACATTATAGAGTTTATGATCCCAGGAGAAGAAACCCTTCCTACAGCCATGACATTAGCCCTCAAATTTCTCTCTGACTCTCCTCTCGCTCTATCGAAACTTATGGATGAGAACATGGAATTGAAGAAGCAGAAGACTAATTGCTTAGATGATTATACATGGACTGACTACATGTCACTGCCATTTACTCAAAATGTCATCAGTGAAACTCTTAGAATGGCCAATATAGTGAATGGAATTTGGAGGAAAGCACTCAAAGACGTCGAAATTAAAGGGTACCTAATTCCAAAAGACTGGTGTGTTATGGCATCTCTTACCTCGGTTCACATGGACGAAAAGAACTATGAAAACCCTTTTAAGTTTGATCCATGGAGATGGGAGAAAATTAGAGTTGTGGCTAGTAACAACTGCTTTACCCCATTTGGGAGTGGACATAGACTATGCCCTGGATTAGAACTTTCTAGGCTTGAGCTCTCTATTTTCCTTCACCATCTTGTTACTACATACAGATGGGTGACTGAGAGAGATGAAATAATATACTTTCCAACTGTTAAGATGAAGAAAAAGCTCCCAATTAGAGTGCAACCAATTAATGCTTGA 1119 0.3735 MGEHSILQLNGNMHKKLHSLVAVFLKSPQFKAQITKDIQNSVKQCLASWTNKSIYFQDEVKKITFTILIKVLMSIGPGDDLDLLKREFGEYIKGLICLPIKFPGTTLYKSLKAKERMMKMVRRIVEERMKKINDNNAEDHCAVNDVVDALLRDKSELYNSSSSSRLMVEMISQNIIEFMIPGEETLPTAMTLALKFLSDSPLALSKLMDENMELKKQKTNCLDDYTWTDYMSLPFTQNVISETLRMANIVNGIWRKALKDVEIKGYLIPKDWCVMASLTSVHMDEKNYENPFKFDPWRWEKIRVVASNNCFTPFGSGHRLCPGLELSRLELSIFLHHLVTTYRWVTERDEIIYFPTVKMKKKLPIRVQPINA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01120 372 PRINTS E-class P450 group I signature 321 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01120 372 PRINTS E-class P450 group I signature 17 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01120 372 PRINTS E-class P450 group I signature 277 301 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01120 372 PRINTS E-class P450 group I signature 311 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01120 372 Coils Coil 204 224 - -
Trre10g01120 372 Gene3D Cytochrome P450 1 370 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01120 372 PRINTS P450 superfamily signature 312 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01120 372 PRINTS P450 superfamily signature 238 249 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01120 372 PRINTS P450 superfamily signature 181 198 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01120 372 PRINTS P450 superfamily signature 321 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01120 372 PANTHER CYTOCHROME P450 26 1 352 - -
Trre10g01120 372 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 314 323 IPR017972 GO:0005506|GO:0016705
Trre10g01120 372 Pfam Cytochrome P450 5 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01120 372 SUPERFAMILY Cytochrome P450 3 369 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01120 Trre-Chr10 9005790 9008156 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01120 1 343 Cytochrome P450 AT3G13730 50.581 8.70e-123 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01120 K12637 - gmx:100799030 608.216