Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01111 ATGGTGAATGAACGAGCTAAGCTTCACATAGCCTTAACTTTTTTACAATTTTGTCATGCAGGAAATCATATATTTCTCAGACTTGCACTTAATACAGGAGTCAGCAAGCTTGTTTTTCCTGTCTATAGAAACATCACTGCTTTCATTCTTCTAGCTCCACTTGCATATTTCACAGAAAAGAAAGATAGGCCAAAAATAACCAGTTATTGTCTGCTACAATTTTTCCTTCTTGGACTTGTTGGAATAACATTGAAAGAAGGATTTTACCTCTTTGGTTTGGACAACACATCACCAACATTTGCTTCTGCTATGCAAAATTCTGTTCCAGCCCTTACATTTCTGATGGCTGTGATACTAAGATATGAGAGCTTACACTTAAATAGGATAAATGGTATGGCTAAGGTTCTTGGAGTACTTGCTTCTGTTGGAGGAGCTTCAATCATTACCCTTTACAAAGGACCTACCATTTATGCTCCAAATCTAGAACTTCATAAAAGAGAAATTTTTTTGTCTTTATTTGAGGATGCAAATGGGAAAAATTTGAGCTTGGGTGGTATCCTTCTATTTGGTCACTGCTTGTGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTTTGAAAAAGTACTCGGCGCAACTCACGGTTTCCGCTTTTACTTGCTTCTTTGGTGTTTTGCAGTTTGGGACAATTGCAGCCTTTCTTGAGAGGGATCCCAAAGCCTGGAAGCTAAACTCCATTGAAGAGGCCTACAGTATTTTGTACTCGGGACTGGTGATTTCCGGGATGACAGCAGCGATACAAATATGGACTATTAGCAAAGGAGGGCCAGTACTTGCTTCAATTTATCTTCCCTTACAGACAATACTTGTAGCTTTGATGGCGCCCATTGTTTTCGGTGAAGAATTCTTCTTGGGAGGGATTATTGGAGCTTTCTTAATTATATCTGGCTTATACCTTGTTGTCTGGGGAAGAAGTCAAGAAACTAAGTTTGCTGAGGAGAATCATTTGAAAGAAAAAAGTGACAGTTCTTCCCTCATACAACCATTGATTCCTGTCCACAATTCTTAG 1068 0.3904 MVNERAKLHIALTFLQFCHAGNHIFLRLALNTGVSKLVFPVYRNITAFILLAPLAYFTEKKDRPKITSYCLLQFFLLGLVGITLKEGFYLFGLDNTSPTFASAMQNSVPALTFLMAVILRYESLHLNRINGMAKVLGVLASVGGASIITLYKGPTIYAPNLELHKREIFLSLFEDANGKNLSLGGILLFGHCLCWSGWIVMQAFVLKKYSAQLTVSAFTCFFGVLQFGTIAAFLERDPKAWKLNSIEEAYSILYSGLVISGMTAAIQIWTISKGGPVLASIYLPLQTILVALMAPIVFGEEFFLGGIIGAFLIISGLYLVVWGRSQETKFAEENHLKEKSDSSSLIQPLIPVHNS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01111 355 Pfam EamA-like transporter family 16 133 IPR000620 GO:0016020
Trre10g01111 355 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
Trre10g01111 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 325 - -
Trre10g01111 355 PANTHER WAT1-RELATED PROTEIN 10 334 IPR030184 GO:0016020|GO:0022857
Trre10g01111 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01111 Trre-Chr10 8947821 8949821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01111 2 350 Nodulin-like Gene Family AT1G75500 55.014 1.09e-139 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01111 - - psat:127120200 581.252