Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01038 ATGGGTTGGCCTTTTATTGGAGAAACATTCAGTTACTTAAAACCTTATTCTGCTACAACAATAGGTGAATTCATGGAACAACACATACAAAGGTATGGTAAAATTTACAAGTCAAAATTATTTGGAGAACCAGCAATAGTTTCAGCAGATGCAGGATTAAATAGGTTTATATTACAAAATGAAGGAAAATTATTTGAGTGTAGTTATCCTAGAAGCATTGGTGGAATACTTGGTAAATGGTCTATGTTAGTTTTGGTTGGTGACATGCATAGAGACATGCGTGTTATATCACTTAATTTTTTAAGTCATGCTAGGCTTAGAACACATCTATTGAAAGAGGTTGAGAAACATACACTTCTTGTTTTAAGTTCTTGGAAAGAAAAATCTACATTTGCAGCTCAAGATGAAGCTAAAAAGTTCACATTTAATTTAATGGCTGAACATATTATGAGTTTACAACCTGGAAAAATAGAGACAGAGAAACTAAAGAAAGAGTATGTTACTTTCATGAAAGGAGTTGTATCAGCACCATTGAATTTTCCTGGAACTGCATACTGGAAAGCATTAAAGTCTAGGTGCACAATATTGAAGTTCATAGAGGGGAAAATGGAAGAAAGGATGAAAAGAATGAAAGAAGGAAATGAAAATTTGGAGGAAGATGATCTTTTGAATTGGGTTTTGAAACATTCAAATCTTTCAACAGAGCAAATTCTTGACTTGATTCTTAGTTTACTCTTTGCTGGTCATGAAACTTCTTCTGTTTCCATAGCTCTTGCTATTTATTTTCTTCCTGGTTGTCCTCAAGCTATACAACAATTAATGGAAGAACACAGAGAAATTGCCAGAACTAAAAAGCAAGCAGGGGAAACAGAATTGACTTGGGAAGACTACAAAAAAATGGAATTTACTCACTGTGTTGTGAACGAGACACTAAGACTAGGTAATGTTGTGAGGTTCCTTCATAGGAAGGCTCTTAAAGATGTTCGGTACAAAGGTTATGATATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATTTGGATCCATTACTTTTTGACCAACCTCAACACTTTAATCCATGGAGATGGCAGAACAATTGTAATCATGGAAATTGCCCAAACTCAAGCACATCTTGCAATAATAATTTCTTACCATTTGGGGGAGGACCACGACTATGTGCAGGATCAGAATTAGCTAAGCTTGAAATGGCTGTTTTCATCCACCATCTCATACTCAATTACCATTGGGAATTGCTTGATAATAAAGATCAAGCTTTTGCCTACCCTTTTGTCGATTTTCCCAAGGGCCTACAAATTAGAGTCCAAGCCCATTCTTTAATATGA 1353 0.3585 MGWPFIGETFSYLKPYSATTIGEFMEQHIQRYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLSSWKEKSTFAAQDEAKKFTFNLMAEHIMSLQPGKIETEKLKKEYVTFMKGVVSAPLNFPGTAYWKALKSRCTILKFIEGKMEERMKRMKEGNENLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVSIALAIYFLPGCPQAIQQLMEEHREIARTKKQAGETELTWEDYKKMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPLLFDQPQHFNPWRWQNNCNHGNCPNSSTSCNNNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELLDNKDQAFAYPFVDFPKGLQIRVQAHSLI 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01038 450 Coils Coil 270 290 - -
Trre10g01038 450 Gene3D Cytochrome P450 1 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 PRINTS E-class P450 group I signature 396 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 PRINTS E-class P450 group I signature 304 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 PRINTS E-class P450 group I signature 344 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 PRINTS E-class P450 group I signature 386 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 PRINTS E-class P450 group I signature 236 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 FunFam Cytochrome P450 90B1 1 446 - -
Trre10g01038 450 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 PRINTS P450 superfamily signature 305 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 PRINTS P450 superfamily signature 247 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 PRINTS P450 superfamily signature 387 396 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 Coils Coil 200 220 - -
Trre10g01038 450 CDD CYP90-like 28 444 - -
Trre10g01038 450 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 389 398 IPR017972 GO:0005506|GO:0016705
Trre10g01038 450 Pfam Cytochrome P450 3 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 SUPERFAMILY Cytochrome P450 2 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01038 450 PANTHER CYTOCHROME P450 26 1 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01038 Trre-Chr10 8302106 8308316 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01038 2 367 Cytochrome P450 AT3G50660 74.935 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01038 K09587 - gmx:100789515 804.283