Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01037 ATGTCTGACTCAGACATAACTTTCTATTGTCTTTCATCAATTCTTTCTCTTCTTTTCATCTTCATTTTCATTCTCATCAAAAGAAAACAATCCAAACCCAAGCTTAATCTTCCACCAGGTAAAATGGGTTGGCCTTTTATTGGAGAAACATTCAGTTACTTAAAACCTTATTCTGCTACAACAATAGGTGAATTCATGGAACAACACATACAAAGGTATGGTAAAATTTACAAGTCAAAATTATTTGGAGAACCAGCAATAGTTTCAGCAGATGCAGGATTAAATAGGTTTATATTACAAAATGAAGGAAAATTATTTGAGTGTAGTTATCCTAGAAGCATTGGTGGAATACTTGGTAAATGGTCTATGTTAGTTTTGGTTGGTGACATGCATAGAGACATGCGTGTTATATCACTTAATTTTTTAAGTCATGCTAGGCTTAGAACACATCTATTGAAAGAGGTTGAGAAACATACACTTCTTGTTTTAAGTTCTTGGAAAGAAAAATCTACATTTGCAGCTCAAGATGAAGCTAAAAAGTTCACATTTAATTTAATGGCTGAACATATTATGAGTTTACAACCTGGAAAAATAGAGACAGAGAAACTAAAGAAAGAGTATGTTACTTTCATGAAAGGAGTTGTATCAGCACCATTGAATTTTCCTGGAACTGCATACTGGAAAGCATTAAAGTCTAGGTGCACAATATTGAAGTTCATAGAGGGGAAAATGGAAGAAAGGATGAAAAGAATGAAAGAAGGAAATGAAAATTTGGAGGAAGATGATCTTTTGAATTGGGTTTTGAAACATTCAAATCTTTCAACAGAGCAAATTCTTGACTTGATTCTTAGTTTACTCTTTGCTGGTCATGAAACTTCTTCTGTTTCCATAGCTCTTGCTATTTATTTTCTTCCTGGTTGTCCTCAAGCTATACAACAATTAATGGAAGAACACAGAGAAATTGCCAGAACTAAAAAGCAAGCAGGGGAAACAGAATTGACTTGGGAAGACTACAAAAAAATGGAATTTACTCACTGTGTTGTGAACGAGACACTAAGACTAGGTAATGTTGTGAGGTTCCTTCATAGGAAGGCTCTTAAAGATGTTCGGTACAAAGGTTATGATATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATTTGGATCCATTACTTTTTGACCAACCTCAACACTTTAATCCATGGAGATGGCAGAACAATTGTAATCATGGAAATTGCCCAAACTCAAGCACATCTTGCAATAATAATTTCTTACCATTTGGGGGAGGACCACGACTATGTGCAGGATCAGAATTAGCTAAGCTTGAAATGGCTGTTTTCATCCACCATCTCATACTCAATTACCATTGGGAATTGCTTGATAATAAAGATCAAGCTTTTGCCTACCCTTTTGTCGATTTTCCCAAGGGCCTACAAATTAGAGTCCAAGCCCATTCTTTAATATGA 1476 0.3557 MSDSDITFYCLSSILSLLFIFIFILIKRKQSKPKLNLPPGKMGWPFIGETFSYLKPYSATTIGEFMEQHIQRYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKHTLLVLSSWKEKSTFAAQDEAKKFTFNLMAEHIMSLQPGKIETEKLKKEYVTFMKGVVSAPLNFPGTAYWKALKSRCTILKFIEGKMEERMKRMKEGNENLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVSIALAIYFLPGCPQAIQQLMEEHREIARTKKQAGETELTWEDYKKMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPLLFDQPQHFNPWRWQNNCNHGNCPNSSTSCNNNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELLDNKDQAFAYPFVDFPKGLQIRVQAHSLI 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01037 491 FunFam Cytochrome P450 90B1 27 487 - -
Trre10g01037 491 Coils Coil 311 331 - -
Trre10g01037 491 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 PANTHER CYTOCHROME P450 26 33 465 - -
Trre10g01037 491 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Trre10g01037 491 SUPERFAMILY Cytochrome P450 32 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 Gene3D Cytochrome P450 26 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 Pfam Cytochrome P450 38 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g01037 491 CDD CYP90-like 69 485 - -
Trre10g01037 491 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01037 Trre-Chr10 8301983 8308316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01037 27 408 Cytochrome P450 AT3G50660 74.194 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01037 K09587 - gmx:100789515 852.047