Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01028 ATGGGTGGTATTGGCGAGCAATTAGTAGCATGTTATCAAGTGGATGTGCATAATCCCAGTCAAATATGGCAAACTGAAAAAATTCTAACAAATGAACTCTCTGTTCTTGCCATTCAACTTGTTTTTACCGTAGTTTTGTCTCGTCTTTTATTTTTTATCTATAAACCTCTTCATCAACCTCGTCTCATTTCACAAATCTCTGTTGGTGTTCTACTAATTCAAGTACTTGGAAAAGTCCCATCTATTTACTTCGTTATTTATCCTGTAACTGGGATGATTAACATTGACGTTCTAACACATGTTGGTATTGTATACTATGCATTCCTAAGTGGTTTAGAGATGAACTTGAATACCATTTTACATGCAAATAAGAAAGCCGCAACCATTGCGATTTCAGGAATCATCTTTCCAATAGTGATGGGACCAACTTTATACGCTCTACATCGGAAAGTTTATGCCAATGTTGATGTATATCCACTTGAAGAAAGTACAATGAATGCTTATATACTATGGACTTTAGTTCTGACTGTAACAGGTTTTCCAGTTGTAGTTCACTCACTTTCTGAGCTCAAACTTCTTTATACTAGTCTTGGTAAGGATGCATTAACATCAGCTATGATAAGTGACACATATGCTTGGATTTTATTCACATTATTTGTTCCATTTGCAACTGATGGTACAAGGGCAATATACTCGGTATTAAGCACCATAATATTTGTTTTAATATGCATCTACGTTGTGCGTCCTATTGTTGTAAAAGTTATTGATCGCAATACAGAAAGAGATGAATGGGATGATAATCAATTACTCTTTGTGGTGATGGGAATTTTCGTTTGTGCATACATAACAGATACTCTTGGCACACATGGCGTTGTTGGGGCTTTTGTGTACGGGTTGATTTTACCTCACGGTAAATTTGCTGATATGGTGGCGTCAATGACTGATGATTTTGGTGGAGCATTTCTAGCACCGCTCTTCTTCAGTGGCAGTGGAATGCGACTCATGATGAGTAACATTTTCAAACACAAGAATTGGCCTTTGACTCTTATGGTTATAATCTTGTTGAGTCTTCCAAAGATTTTAAGCACTTTGTTTGCCACTTTCTTTTTTGGCATGCGTACTCGTGATAGTTTTGCTCTAGGCTTAATTCTTAATACCAAAGGTGCTATTGCACTAATAATGCTCAATACTGCTTGGGATAAATCGATTCTTTCTGGAGCAACTTACAGTGTTTTAACCTCTGGAGTCCTTTTAATGACTATAGTGGTGCCTCCCATCATAAATATCATATACAAGCCCAGAAAGCGATTTGAACAAAACATGCTAAAGACTATAGAAAAGCTAAGACTTGATGCAGAGCTCAGGATTCTAGCATGTGTTCATAATACTCGCCAAGCAACAGGGATTATTAGCCTCATCGAATCTTTCAATGCCACCAGGCTTTCACCTATACATGTTTTTTCACTTTACCTTGTTGAGCTCACAGGACGTGCTGGTGCACTTGTTGCAGCTCATATGGAAAAGCCTAGTGGCCAACCCGGAGCACAAAATCTTACAAGATCTCAGGAAGAGCTAGAGAGCATTAACAAGACCTTTGGAGCATTTGGAGAAACATATGATGCTGTCAGAGTGGAAACCTTAAGAGTTGTGTCATCTTATGCAACCATTCACAAGGACATATACAACTCCGCTAATGATAAACGAACAAGTTTGATTATCCTTCCATTTCACAAACAAGTAACTTCAGATGGTGCACTTAAAATAACCAATATTGTGCACAAAGATATAAATGTGAATGTGATGCAAAGTGCACCTTGCTCTGTCGGAATCTTTGTTGATCGTGATCTTGGGAGATTATCGAAAATGAAATTTTCTATTTGTATGATCTTTATTGGAGGCCCCGATGATCGTGAAGCCTTAGCTGTTGCATGGAGGATGGCTGCGCACCCAAGAACTCAATTATCAGTGATTCGAATGCTTCTGTTTGCTGAAATTGCAGAAGTAGACACCTCATGTCACACTGGAGCACAAAGCATACTATCTATTGTAATGGATAATGATATGCAAAATGACTTAGATGATGAATTTGTGAATTCCTTTAGACTGACAGCAGTTAACAACAATGATTCTATATCCTATTCAGAGGTTGATGTTCATTCAGGTGAAGATATTTCCATAGTCCTCAATGAGCTAAAACAATTTGGCTGTGACTTATACATAGTTGGACAAGGGAATCATAGAAACTCACGAGTCTTTTCAAATTTATTGGAATGGTGTGATTGTCCAGAACTTGGAGTTATAGGGGATATGTTGGCATCAGACAATTTTGGATCTCGCTCATCTGTACTAGTTGTGCAACAATATTGGTATGGAGAAATGGTTTTGCGAAATCAACACGACCACATCTTTTACTAA 2415 0.3781 MGGIGEQLVACYQVDVHNPSQIWQTEKILTNELSVLAIQLVFTVVLSRLLFFIYKPLHQPRLISQISVGVLLIQVLGKVPSIYFVIYPVTGMINIDVLTHVGIVYYAFLSGLEMNLNTILHANKKAATIAISGIIFPIVMGPTLYALHRKVYANVDVYPLEESTMNAYILWTLVLTVTGFPVVVHSLSELKLLYTSLGKDALTSAMISDTYAWILFTLFVPFATDGTRAIYSVLSTIIFVLICIYVVRPIVVKVIDRNTERDEWDDNQLLFVVMGIFVCAYITDTLGTHGVVGAFVYGLILPHGKFADMVASMTDDFGGAFLAPLFFSGSGMRLMMSNIFKHKNWPLTLMVIILLSLPKILSTLFATFFFGMRTRDSFALGLILNTKGAIALIMLNTAWDKSILSGATYSVLTSGVLLMTIVVPPIINIIYKPRKRFEQNMLKTIEKLRLDAELRILACVHNTRQATGIISLIESFNATRLSPIHVFSLYLVELTGRAGALVAAHMEKPSGQPGAQNLTRSQEELESINKTFGAFGETYDAVRVETLRVVSSYATIHKDIYNSANDKRTSLIILPFHKQVTSDGALKITNIVHKDINVNVMQSAPCSVGIFVDRDLGRLSKMKFSICMIFIGGPDDREALAVAWRMAAHPRTQLSVIRMLLFAEIAEVDTSCHTGAQSILSIVMDNDMQNDLDDEFVNSFRLTAVNNNDSISYSEVDVHSGEDISIVLNELKQFGCDLYIVGQGNHRNSRVFSNLLEWCDCPELGVIGDMLASDNFGSRSSVLVVQQYWYGEMVLRNQHDHIFY 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01028 804 Gene3D - 34 440 IPR038770 -
Trre10g01028 804 PANTHER CATION/H + ANTIPORTER 22 788 - -
Trre10g01028 804 Pfam Sodium/hydrogen exchanger family 40 429 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01028 Trre-Chr10 8217217 8219999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01028 9 792 Antiporter Super Family AT2G13620 36.421 1.25e-171 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01028 - - gmx:100804266 1139.79