Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01026 ATGGGTGGTAGTAGTGGTGTGCTTCCAGCATGTTATGAAATATATGTGCAAAGTTCAAGTCGAATATGGCAAACTGATAATATCTTTAACAAGGAGCTTCCCATTATTGCCACTCAATTTGTCTTTATTGTAGTTCTGTCTCGTCTTTTATTCTTCATCTATAAACCTTTTCATCAATCTCGTCTCATTTCACAAATCTCTGTTGGTTTTCTATTAACTCCGCCATTACTTGGGCAATGCGATGCTATTTTCACATTCATTAGTCCCGTAAATGGGGTGCTTAACGTCGAAGTTCTAGCACATATTGGTGTCATATACATTGCATTTCTTAGTGGTTTGGAGATCAACTTGAATACCATATTACATGTTAAAAAGAAAGCTGCAACCATTGCAATTTTCGGGATCATCTTTCCAATGGTGATGGGACCCACTTTATACACTCTACATCGAAAAGTTTATGTCAACAGTGATGCATATCAACTTGAAGAAAGTAACATGAATGCTTATGTACTATGGACTTTAGTTTTAACTGTAACAGGTTTTCCACTTGTAGTTCACTCTCTTTCTGAGCTCAAACTTCTTTATACTGGTCTTGGTAAGATTGCATTAACAGCCACTATGATCAGTAACACATATGCTTGGATTTTATTTACATTATTTATTCCATTTTCACTTAATGGTCCAAAAGCAATATACTCGGTGGTAAGCACCGCAATATTTGTTTTCATTTGCATCTTTGTGGTGCGTCCTATCATTATAAATGTCATTGATCGCAAGGCAGAAAGAGATGAATGGGATGAAAACCAATTACTATTTGTAGTTATGGGGCTTTTGGTTTGCTCACACATAACAGATGTTCTTGGCACACATAACATTGTTGGAGCTTTTGTGTACGGGTTGATTTTACCTCACGGTAAATTTGCTGACATAGTAGTTTCAATGACTGATGATTTCGGTGGCGCATTTTTGGCACCATTATTCTTTACTGGCAGTGGTCATCGGCTCATGGTGGAAGCCATTTTCAACCAACAAAATTGGCCTTGGACAGTTATGGTTATAATCCTATTGTGTGTTCCAAAGATATTAAGCACTTTATTTGCTACCTTCTTTTTTGGTATGCCTGTTCGTGACGGTTTTGCTCTGGGGGTAATTCTTAATACAAAGGGTGTGGTTGCATTGATAATGCTTAACACCGCATGGGATAGATCGATTCTTTCTGTACCAACCTATGCTGTTTTAACTTCTAGTGTCCTTTTAATGACTGTAGTGGTGTCTCCCATTATCAATGCCATATATAAGCCCAAAAAGCGATTTGAGCAAAACAAGCTAAAGACTATACAAATGCTAAGACTTGATGCAGAGCTCAGGATTTTAGCATGTGTTAACAATACTCGCCAAACAACAGGGATTATCAGCCTCATTGAATCTTTCAATGCCACTAGACTTTCTCCTATACATGTTTTTGCACTTTACCTTGTTGAGCGCACAAGACGTGCTGGCGCACTTGTTGCTGCTCATATGGCTGTTCATATGGACAAGCCTAGTAGCCAACCTATGGAACAAAATCTTACAAGATCCCAAGGAGAGCTAGAATACATTAACAATATATTTGGAGCATTTGGAGAGGCATATGATGCTGTTAGAGTGCAAATCTTAAATGTTGTGTCAGCCTATGCAACCATTCACGAGGACATTAACAACTCAGCAAATGAAAAACGGACAAGCTTGATTATCCTTCCATTCCACAAACAATTAAGTTCAGGAGGTGTACTCGAAACAACTAATATTGCATACAGAGATATAAATTTGAATGTGATGCAAAGTGCACCTTGCTCTGTGGGAATATTTGTTGATCGCGGTCTTGGGTCATTATCAAAAATGAACTTTTATATACGAATGATATTTGTTGGAGGTCCTGACGATCGTGAAGCCTTAGCAGTTGCATGTAGGATGGTAGGGCACCCAAGAATCCGATTATCAGTGATTCGAATGCTCCTGTTTGATGAAGCTGCAGAAGTAGACACCTCAAGTCATGTTGAAGCACAAGGAAGCATACTATCTGTTGTAATGGATAATGAGAAGCAGAAGGAGTTAGATGATACATATGTTAATTCATTTAGACTAACAGTAGTGAACAACAATGATTATGTATCTTATTCAGAGGTCGATATCTATTCAGCTGAAGATATTCCCGCTATCCTCAATGAGCTAGAGAAAGTTGGTTGCGATTTATACATAATTGGACAAGGAAATCATAGGAACTCTCGGGTCTTTTCAAATTTATCGAAATGGTGTGATTGTTTAGAACTTGGAGTTATAGGGGATATGTTGGCCTCAGACAATTTTAGTTCGCGCTCATCTATGCTAGTTGTGCGACAATATGGGTATGGAGGAATGGTTATGGGAAACAAAACCAACCATGTGACTACTAATAGCAATGGTTTTGAGGCACTTGTCGTGAAGACAGAATAA 2472 0.3823 MGGSSGVLPACYEIYVQSSSRIWQTDNIFNKELPIIATQFVFIVVLSRLLFFIYKPFHQSRLISQISVGFLLTPPLLGQCDAIFTFISPVNGVLNVEVLAHIGVIYIAFLSGLEINLNTILHVKKKAATIAIFGIIFPMVMGPTLYTLHRKVYVNSDAYQLEESNMNAYVLWTLVLTVTGFPLVVHSLSELKLLYTGLGKIALTATMISNTYAWILFTLFIPFSLNGPKAIYSVVSTAIFVFICIFVVRPIIINVIDRKAERDEWDENQLLFVVMGLLVCSHITDVLGTHNIVGAFVYGLILPHGKFADIVVSMTDDFGGAFLAPLFFTGSGHRLMVEAIFNQQNWPWTVMVIILLCVPKILSTLFATFFFGMPVRDGFALGVILNTKGVVALIMLNTAWDRSILSVPTYAVLTSSVLLMTVVVSPIINAIYKPKKRFEQNKLKTIQMLRLDAELRILACVNNTRQTTGIISLIESFNATRLSPIHVFALYLVERTRRAGALVAAHMAVHMDKPSSQPMEQNLTRSQGELEYINNIFGAFGEAYDAVRVQILNVVSAYATIHEDINNSANEKRTSLIILPFHKQLSSGGVLETTNIAYRDINLNVMQSAPCSVGIFVDRGLGSLSKMNFYIRMIFVGGPDDREALAVACRMVGHPRIRLSVIRMLLFDEAAEVDTSSHVEAQGSILSVVMDNEKQKELDDTYVNSFRLTVVNNNDYVSYSEVDIYSAEDIPAILNELEKVGCDLYIIGQGNHRNSRVFSNLSKWCDCLELGVIGDMLASDNFSSRSSMLVVRQYGYGGMVMGNKTNHVTTNSNGFEALVVKTE 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01026 823 Gene3D - 36 442 IPR038770 -
Trre10g01026 823 PANTHER CATION/H + ANTIPORTER 17 794 - -
Trre10g01026 823 Pfam Sodium/hydrogen exchanger family 42 428 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01026 Trre-Chr10 8178383 8181291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01026 11 794 Antiporter Super Family AT2G13620 37.892 8.93e-178 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01026 - K26731 gmx:100804266 1185.24