Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g01001 ATGAAGTTCTCTCCCTCAGCTGCTTCATGGAAACCGTCACCTCGCTCCCATCGTCATGCCTCTTCCTCCACCGTCAGGGTTTCTCTGCATATGGGAGTGCAAGCCTTAAATGGACAGGGATATTGGAGGATTAGTGACAATTTGAAGTTGAAGGGTCGTGCTGCTGCTGATACGGAAAAAGGTACTAAGTTTGCTCCTGAAGACATTATGCAAAATGTTGATTAG 225 0.4667 MKFSPSAASWKPSPRSHRHASSSTVRVSLHMGVQALNGQGYWRISDNLKLKGRAAADTEKGTKFAPEDIMQNVD 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g01001 74 MobiDBLite consensus disorder prediction 1 25 - -
Trre10g01001 74 MobiDBLite consensus disorder prediction 53 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g01001 Trre-Chr10 8000177 8000875 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g01001 49 74 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 80.769 5.32e-09 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g01001 K02898 - gmx:100779956 48.9062