Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00977 ATGGCTATCTTCTTTCTTCCATCTAGTTCTCATGCTCTTTTTCTTGCATTTATGTTGTTTTTTCTCACTAATATCTCAGCTCAACCTCTACAAATCAGTGAAACAAACTTTTCATGCACGGCCGATTCACCTCCTTCATGTGATACCTATGTGACATACTTTGCCAAATCTCCGAATTTCTTGAGCCTAACAAACATATCTGATATATTTGATATGAGTCCTTTATCCATTGCAAAAGCCAGTAACATAGAAGATGAAGATAAAAAGCTGATTGAAGGACAAGTCTTACTAGTGCCTGTAACTTGCGGTTGCGCTAGAAATCGCTATTTCGCAAATTTCACTTATACAATCAAGCTAGGTGACAACTACTTCATAGTATCAACCACTCAATACCAGAATCTCACCAATTATAAGGAAATGGAAGATTTCAACCCAAATCTAAGTCCAAATCTATTGCCACAAGATATCAAAGTTGTAGCCCCTTTATTCTGCAAGTGCCCTTCAAAGAATCAGTTGAACAAAGGAATAAAGTATCTCATTACTTATGTGTGGCAAGCTAATGATAATATTACCCTTGTAAGTTCGAAGTTTGGTGCATCACAAGCGGACATGTTTGCCGAGAACAGTCCGAAGTTCACTGCTGAAACCAATGTTCCAATTTTAATCCCAGTGACAAAGTTACCAGAACTCGATCAACCGTCTTCAAATGGAGGAAAAAGCAGCATTCAAAAACTTCCTGTTATAATTGGTGTTTCGGGATACGTAAGCAAGCCAACAATGTATGAAATGGATGTGATCATGGAAGCTACAATGAACCTGGATGAGAATTGTAAGATTGGTGAAACAGTCTACAAGGCTAATATAGATGGTAGAGTTTTAGCAGTGAAAAATATCAAGAAAGATGCTTCCGAGGAACTGAAAATTCTGCAGAAGGTAAATCATGGAAATCTTGTGAAACTAATGGGTGTATCTTCTGACAATGATGGAAACTGTTTCCTTGTTTATGAGTATGCTCAAAATGGATCACTTGACGAGTGGCTGTTCTCGGAATCTTCGAAAACTTCGAATTCTGTTGGCTCACTTACATGGTCTCAGAGAATAACCATAGCAATGGATGTTGCAGTAGGTCTACAATACATGCATGAACATACTTATCCAAGAATAATCCACAGAGACATCACAACAAGTAATATCCTTCTTGATTCAAACTTTAAGGCCAAGATAGCCAATTTTTCGATGGCTAGAACTTCAACAAACAACATGATGCCAAAAATAGATGTTTTTGCTTTCGGGGTGGTTCTGATAGAGTTGCTTACCGGTAAGAAAGCAGTAACAACAAAGGAAAATGGGGAGGTTGTTATTTTGTGGAAGGATTTCTGGAAGATTTTTGATATAGAAGGGAATAGAGAAGAAAGACTAAGAAAATGGATGGATCCTAAGTTAGAGGACTTCTATCCTATTGAACATGCCCTAAGTTTGGCTTCTTTGGCAGTGAATTGTACTGCAGATAAATCATTGTCAAGACCAAGTATTGCAGAAATTGTTCTTTGTCTTTCTCTTCTCAATCAACCATCATCTGAACCAATGTTGGAAAGATCTTTAACATCTGGTTTAGATGCCGAAGCTACTCATGTTGTTACTTCTATCGCAGCTCGTTGA 1659 0.3767 MAIFFLPSSSHALFLAFMLFFLTNISAQPLQISETNFSCTADSPPSCDTYVTYFAKSPNFLSLTNISDIFDMSPLSIAKASNIEDEDKKLIEGQVLLVPVTCGCARNRYFANFTYTIKLGDNYFIVSTTQYQNLTNYKEMEDFNPNLSPNLLPQDIKVVAPLFCKCPSKNQLNKGIKYLITYVWQANDNITLVSSKFGASQADMFAENSPKFTAETNVPILIPVTKLPELDQPSSNGGKSSIQKLPVIIGVSGYVSKPTMYEMDVIMEATMNLDENCKIGETVYKANIDGRVLAVKNIKKDASEELKILQKVNHGNLVKLMGVSSDNDGNCFLVYEYAQNGSLDEWLFSESSKTSNSVGSLTWSQRITIAMDVAVGLQYMHEHTYPRIIHRDITTSNILLDSNFKAKIANFSMARTSTNNMMPKIDVFAFGVVLIELLTGKKAVTTKENGEVVILWKDFWKIFDIEGNREERLRKWMDPKLEDFYPIEHALSLASLAVNCTADKSLSRPSIAEIVLCLSLLNQPSSEPMLERSLTSGLDAEATHVVTSIAAR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00977 552 Gene3D Transferase(Phosphotransferase) domain 1 338 419 - -
Trre10g00977 552 Gene3D Transferase(Phosphotransferase) domain 1 420 521 - -
Trre10g00977 552 ProSiteProfiles Protein kinase domain profile. 243 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g00977 552 SUPERFAMILY Protein kinase-like (PK-like) 259 520 IPR011009 -
Trre10g00977 552 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 250 523 - -
Trre10g00977 552 Gene3D Phosphorylase Kinase; domain 1 251 337 - -
Trre10g00977 552 ProSitePatterns Tyrosine protein kinases specific active-site signature. 388 400 IPR008266 GO:0004672|GO:0006468
Trre10g00977 552 Pfam Protein tyrosine and serine/threonine kinase 299 419 IPR001245 GO:0004672|GO:0006468
Trre10g00977 552 FunFam Os07g0541700 protein 338 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00977 Trre-Chr10 7799402 7801189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00977 81 521 Receptor kinase-like Gene Family AT3G21630 29.291 2.52e-58 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Trre10g00977 PK_Tyr_Ser-Thr 2.4e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00977 - - cam:101515074 887.486