Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00975 ATGGAAGCTCAACTTTCCTTCTTTGTTATTCCCTTATTTCTTTTGTTCCTATTGCATAATTTGTTAGCAAAATATTATAAGCCAAAAACAAGCCTTAACAAATTACCACCTGGTCCAATTAAATTTCCACTCATTGGTAACCTTCATCAACTAGCCATGTCAAGAAAACTTCCACATCATGCTCTAAGAGAACTTGCACAAAAATATGGACCTCTTATGCACCTACAACTTGGTGAAATTTCCACCGTGATTGTATCCTCCCCCAAATTGGCAAAAGAAGTAATGAAAACCCATGATGTTGCTTTTTCCAATAGGCCCAAACTTCTTTCCCCTGAAATTATGGGCTATGGCTCAAAAGATATTGTATTTTCTCCATATGGTGAATTTTGGAAACAAATGAGGAAAATATGTGTATTAGAGCTTCTAAGTGCTAAAAGGGTTCAATCTTTCTCTTATATTAGAGAAGATGAGAATGCAAAATTCATACAATCAATTCAATCATCAGCAAACTCTAAAATAAATCTCACTAGTAGAATTTTCTCAATGGTGACTTCCGTTATTTCTAGAGCAGCATTCGGTGACAAATCAAATGATCAAGATGAATTTGTGAATTTGGTTAAAAAGGTTGTAGAATTGGCGGCGGGATTTGATGTTGACGATTTGTTTCCTTCAATTAAATTGTTACATAAACTAACGGGGATGAAACCGAAATTGGAGAAAATTCACAAACGGGTAGACGAAATCATAGAAAACATTGTTAGACAACATCAAGAAAAGCTAGCAAAAAGAAAAGAAAACAACAACACTGAAGTTGAGAATGAAGATCTTGTGGATGTTCTATTGCGAATCCAAGAAACTAATAACCTAGATATCCAAATAACAACCAACAATATCAAAGCTGTAATTTGGGATGTATTCGTGGCTGGAACTGATACAACAGCAACAACAATAGAGTGGGCTATGTCAGAAATAATGAAGAATCCAAGTGTGAGAGAGAAAGCACAAGCTGAATTAAGACAAATATTGAGAGGAAAGAAAATCATATCTGAATCTGATCTACACGAACTTACTTACTTAAAGTTAGTGATCAAGGAGACATTGAGGTTGCATCCGCCATCACCTTTGTTAGTCCCTAGGGAATGCACTGAATTGACCATCATTGATGGGTATCAAATACCAAAAGGTACTAAAGTCATGATAAATGCATGGGCTATGGCAAGAGATCCTCACCATTGGACTGATGCTGAGATGTTCATTCCAGAGAGGTTTGATGGTAGTTTAATTGATTTCAAAGGGAATAACTTTGAATATATTCCTTTTGGAGCTGGAAGGAGAATGTGTCCAGGCATATCATTTGGTTTAGCTAGTATTGTTCTTCCACTTGCTCTATTACTTTACCACTTCAATTGGGAACTTCCAAATCAGATGAAACCAGAGGATTTGGATATGACTGAACATTTTGGATTGGCAGTTGGAAGGGAAAATGAGTTGTGTTTGATTCCTACTGTATATATTATGTAA 1521 0.3577 MEAQLSFFVIPLFLLFLLHNLLAKYYKPKTSLNKLPPGPIKFPLIGNLHQLAMSRKLPHHALRELAQKYGPLMHLQLGEISTVIVSSPKLAKEVMKTHDVAFSNRPKLLSPEIMGYGSKDIVFSPYGEFWKQMRKICVLELLSAKRVQSFSYIREDENAKFIQSIQSSANSKINLTSRIFSMVTSVISRAAFGDKSNDQDEFVNLVKKVVELAAGFDVDDLFPSIKLLHKLTGMKPKLEKIHKRVDEIIENIVRQHQEKLAKRKENNNTEVENEDLVDVLLRIQETNNLDIQITTNNIKAVIWDVFVAGTDTTATTIEWAMSEIMKNPSVREKAQAELRQILRGKKIISESDLHELTYLKLVIKETLRLHPPSPLLVPRECTELTIIDGYQIPKGTKVMINAWAMARDPHHWTDAEMFIPERFDGSLIDFKGNNFEYIPFGAGRRMCPGISFGLASIVLPLALLLYHFNWELPNQMKPEDLDMTEHFGLAVGRENELCLIPTVYIM 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00975 506 Coils Coil 254 274 - -
Trre10g00975 506 Gene3D Cytochrome P450 29 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 Pfam Cytochrome P450 36 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Trre10g00975 506 PANTHER OS08G0105600 PROTEIN 60 505 - -
Trre10g00975 506 SUPERFAMILY Cytochrome P450 36 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 FunFam Cytochrome P450 71D8 28 501 - -
Trre10g00975 506 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00975 506 CDD CYP71-like 68 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00975 Trre-Chr10 7782502 7784317 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00975 12 505 Cytochrome P450 AT3G26300 41.667 2.13e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00975 - K15472 gmx:100783298 700.664