Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00972 ATGCAAGCCATGGAAATTCAACTTTCCTTTATTCTTATTCCTTTCTCAGTTTTCATACTTTTGCGTTGGCTTGCATCAAAATATTACAATCCTAAAACCATTGCTAATTACAAATTGCCACCTGGCCCAAGAAAATTACCTCTTATTGGTAATTTGCATCAACTAGCATTTGCAGGAAAACTTCCACATCGTGGTCTCCAAAAACTATCTCAAAAACATGGACCTTTAATGCACCTATTACTAGGTGAAATTAATGCTGTTGTTGTTTCATCCTCAAAATTAGCCAAAGAAATAATGAAAACACATGATGTTGTTTTTGCTAATAGGCCACAACGTCTTGCTCCTCAAATTTTAACCTATGGTTTTAAGGATATTGTATTTTCTCCTTATGGTGATTATTGGAGACAAATGAGAAAAATATGTGTCTCAGAGATTCTAAGTGCCAAAAGGGTTCAATCTTTTTTCTTATATTAG 474 0.3376 MQAMEIQLSFILIPFSVFILLRWLASKYYNPKTIANYKLPPGPRKLPLIGNLHQLAFAGKLPHRGLQKLSQKHGPLMHLLLGEINAVVVSSSKLAKEIMKTHDVVFANRPQRLAPQILTYGFKDIVFSPYGDYWRQMRKICVSEILSAKRVQSFFLY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00972 157 Gene3D Cytochrome P450 33 156 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00972 157 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 15 154 - -
Trre10g00972 157 Pfam Cytochrome P450 40 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00972 157 SUPERFAMILY Cytochrome P450 40 154 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00972 Trre-Chr10 7757036 7757509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00972 32 154 Cytochrome P450 AT5G24950 49.593 3.00e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00972 - - gmx:100816377 212.616