Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00971 ATGCATGCCATGGAAATTCAATTTTCCTTTCTTCTTATTCCTTTCTCTGTTTTCATAGTCATACTTTGGCATTGGCTTGCAACAAAATATTACAAACCAAAAACCATAGCCAATTACAAATTGCCACCTGGCCCAAGAAAATTACCTCTCATTGGTAATTTGCATCAACTAGCATTTGCAGGAAAACTTCCACATCATGGTCTCCAAAAACTATCTCGAAAACATGGACCTTTAATGCACCTAAAACTAGGTGAAATTAATGCTGTTGTTGTTTCATCCTCAAACTTAGCCAAAGAAATAATGAAAACACATGATGTTGTTTTTTCTAATAGGCCACAACTTCTTTCTCCTCAAATTTTAGGCTATGGTTTTAAAGATATTGTATTTTCTCCATATGGTGATTATTGGAGACAAATGAGAAAAATATGTGTCTTAGAGATTCTAAGTGCCAAAAGGGTTCAATCTTTTTCTTATATTAGAGAAGATGAGACAAACAAATTAATACAATCAATTAAGTCATTAGCAGGATCACAAATTAATCTTACTAATAGAATTTTTTCAATGATAAATTCTATTATTTCAAGAGCAGCGTTCGGTGATAAGTCAGAAGATCAAGATGAATTTGTGTCTTTGATTCGAAAAGCAATAGTGGTTTCTGGTGGATTTGAGTTTGATGATTTGTTTCCTTCGATGAAATTTATTCATACGCTAATGGGGGTGAAAGCAAAAATTGAGAAAATTCACAAAAGCGTAGACAAAATCTTAGATAATGTTGTGAGAAAACATCAAGAAAAGAGAGCAAGAGTTAATGAAGGTAACAATTGTGAAATTGAAAAGGAAGATCTTATGGATGTTCTATTGAGAGTCCAACAAAGTGGCAGCCTTGATATCCAATTGACAATCAACAACATCAAAGCTGTAATTTGGGATGTGTTTGTTGCTGGAACTGATACATCATCAACAACAATAGAATGGGCTATGTCAGAAATGATGAAAAATCCAAGAGTGAGGGAGAAGGCACAAGCAGAATTAAGACAAACATTTAGAGGAAAAAAACAAATATGTGAAATTGATCTAGAGAAACTAACTTATTTAAAGTTAGTTATCAAAGAAACATTAAGGTTACATCCACCTTCTCCTTTGTTGATTCCAAGAGAATGCACTGAATTAACCAAAATAGATGGATATGACATACCTAAAAAGACTACGGTCTTGATAAATGCATGGGCAATAGGAAGAGATCCACAATATTGGAATGATGCTGAAAAGTTCATTCCAGAGAGATTTGATGGTAGTTTCATTGATTTCAAAGGAAATAACTTCGAGTATATTCCTTTTGGAGCTGGAAGAAGAATGTGTCCGGGTATGACATTTGGTTTAGCAAGTGTTATGTTTTCCTTGGCTATATTACTCTATCACTTTAATTGGGAGCTTCCAAATCAGATGAAACCTGAAGATTTGGATATGATCGAAGTTTTTGGATTGACAGTTGGAAGGAAAAATGGATTGTGTTTGATTCCAACCATTCATGACGTCTAA 1539 0.3372 MHAMEIQFSFLLIPFSVFIVILWHWLATKYYKPKTIANYKLPPGPRKLPLIGNLHQLAFAGKLPHHGLQKLSRKHGPLMHLKLGEINAVVVSSSNLAKEIMKTHDVVFSNRPQLLSPQILGYGFKDIVFSPYGDYWRQMRKICVLEILSAKRVQSFSYIREDETNKLIQSIKSLAGSQINLTNRIFSMINSIISRAAFGDKSEDQDEFVSLIRKAIVVSGGFEFDDLFPSMKFIHTLMGVKAKIEKIHKSVDKILDNVVRKHQEKRARVNEGNNCEIEKEDLMDVLLRVQQSGSLDIQLTINNIKAVIWDVFVAGTDTSSTTIEWAMSEMMKNPRVREKAQAELRQTFRGKKQICEIDLEKLTYLKLVIKETLRLHPPSPLLIPRECTELTKIDGYDIPKKTTVLINAWAIGRDPQYWNDAEKFIPERFDGSFIDFKGNNFEYIPFGAGRRMCPGMTFGLASVMFSLAILLYHFNWELPNQMKPEDLDMIEVFGLTVGRKNGLCLIPTIHDV 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00971 512 Pfam Cytochrome P450 42 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Trre10g00971 512 PANTHER OS08G0105600 PROTEIN 67 510 - -
Trre10g00971 512 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 Gene3D Cytochrome P450 36 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 SUPERFAMILY Cytochrome P450 42 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 FunFam Cytochrome P450 71D8 34 507 - -
Trre10g00971 512 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00971 512 CDD CYP71-like 74 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00971 Trre-Chr10 7717736 7719750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00971 31 508 Cytochrome P450 AT3G26300 44.467 2.53e-141 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00971 - K15472 gmx:100816377 721.465