Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00970 ATGCATGACATGGAAGCTCAAATTTCCTTTGTTCTTATTCCCTTCTCTGTTTTCATAATTTTGCATTGGCTTGCAACAAAATATTACAAGTCAAAAACCATTGCTTACAAATTGCCACCTGGCCCTAGAAAATTACCTCTCATTGGTAACTTGCATCAACTAGCATTAGCTGGAAATCTTCCACATCATAGTCTCAAAAAACTTTCTCAAAAATATGGACCTTTAATGCACCTAAAACTTGGTGAAAATAATGTAGTAGTTGTTTCTTCCTCAAACTTAGCCAAAGAAGTAATGAAAACACATGATGTTGTTTTTGCTAATAGACCACACATTGTATCTTCTGAAATTTTATGCTATGGATCTAAAGATATTCTATTTTCTCCATATGGTGATTATTGGAGACAAATGAGAAAAATATGTGTCTTAGAGATTCTAAGTGCCAAAAGGGTTCAATCTTTTTCTTACATTAGAGAAGATGAGACACAAAAATTTATACAATCAATTAAGTCATTTGCAGGCTCAAAAATCAACCTCACAACTAGAATATTTACATTGATAAATTCTATTATTTCGAGAGCAGCGTTTGGTGAAAAAGCAGATGGTCAAGATGAATTTGTGTCTTTGATTAGAGAAGCGGTAGAGCTTTCAAGTGGACTTGATCTTGATGATTTGTTTCCTTCAATAAAACTTATTCATAAACTATCGGGGTTGAAAACAAAAGTTGAGAAAATTCACCAAAGGGTAGACAAAATTTTAGATAATGTTGTGAGAAAACATCAAGAAAAAAGGGCAGGAGAAAATGAAGGTAATAAGAGTGAAATTGAGAAGGAAGATCTAATGGATGTTCTTTTGAGAGTCCAACAAAGTGGAAGCCTTGATATCCAATTGACAATCAACAACATCAAAGCTGTGATTTGGGATGTATTTGTTGCTGGAACTGATACATCGGCAACAACAATAGGGTGGGCTATGTCAGAAATGATGAAAAATCCAAGAGTTAGAATAAAAGCACAAGCTGAATTAAGAGAAATGTTCAATGGAAAGGAAATAATATCTGAAACTGATATAGAGGAACTCCCTTACTTAAAGTTAGTGATCAAAGAAACATTAAGATTACACCCACCTTCTCCTTTGTTGGTTCCAAGAGAAAATACTGAATTAATCAAAATAGATGGATATGATATACCAAAAAAGACTACAGTGTTGATAAATGCGTGGGCAATAGGAAGAGATCCACAATATTGGAATGATGCTGAGATGTTCATGCCAGAGAGATTTGATGGTAGTTTTATCGATTTCAAGGGAAATAACTTCGAGTATACTCCTTTTGGAGCTGGAAGGAGAATGTGTCCGGGTATGCAATTTGGTTTAGCTAGTGTTATGTTTCCTCTGGCTCTGTTGGTCTATCACTTTAATTGGGAACTCCCAAATCAGATGAAATCTTTGGATTTAGATATGACAGAAGATTTTGGATTAACAGTTGGAAGAAAAAATGACTTGTGTTTGATTCCAACTATTTATGATGCCTAA 1530 0.3418 MHDMEAQISFVLIPFSVFIILHWLATKYYKSKTIAYKLPPGPRKLPLIGNLHQLALAGNLPHHSLKKLSQKYGPLMHLKLGENNVVVVSSSNLAKEVMKTHDVVFANRPHIVSSEILCYGSKDILFSPYGDYWRQMRKICVLEILSAKRVQSFSYIREDETQKFIQSIKSFAGSKINLTTRIFTLINSIISRAAFGEKADGQDEFVSLIREAVELSSGLDLDDLFPSIKLIHKLSGLKTKVEKIHQRVDKILDNVVRKHQEKRAGENEGNKSEIEKEDLMDVLLRVQQSGSLDIQLTINNIKAVIWDVFVAGTDTSATTIGWAMSEMMKNPRVRIKAQAELREMFNGKEIISETDIEELPYLKLVIKETLRLHPPSPLLVPRENTELIKIDGYDIPKKTTVLINAWAIGRDPQYWNDAEMFMPERFDGSFIDFKGNNFEYTPFGAGRRMCPGMQFGLASVMFPLALLVYHFNWELPNQMKSLDLDMTEDFGLTVGRKNDLCLIPTIYDA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00970 509 Pfam Cytochrome P450 39 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 PANTHER OS08G0105600 PROTEIN 63 507 - -
Trre10g00970 509 CDD CYP71-like 71 500 - -
Trre10g00970 509 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 FunFam Cytochrome P450 71D8 31 504 - -
Trre10g00970 509 SUPERFAMILY Cytochrome P450 39 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 Gene3D Cytochrome P450 25 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Trre10g00970 509 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00970 509 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00970 Trre-Chr10 7708073 7709927 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00970 17 507 Cytochrome P450 AT3G26300 44.400 2.70e-143 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00970 - - gmx:100785175 686.797