Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00969 ATGGAAGTGAAACTTTCTTCCATTGTTATTCCATTCTTTCTTTTCTTAATGCTACGTTTGCTTGCAAAACATTACAAACAAAAAAACTACAAATTACCACCTGGTCCAATGAAGTTACCATTTATTGGTAACCTTCATCAAATAGCAACATTAGGATCACTTCCACATCGTGCTTTTCAACAACTTGCTAAAAAATATGGACCTATGGTCCATCTAAAACTTGGTGAAATTTCTACTATAGTTATATCCTCACCAAAATTAGCAAAAGAAATATTGAAAACCCATGATGTTATTTTTGCTAATAGGCCACAACTTCAAGCTCCTAATATTATGGCTTATGGTTCAATAGATATTGCATTTTCTCCACATGGTGATTATTGGAGACAAATGAGAAAAATATGTATGTTAGAGCTTTTAAGTAACAAAAGGGTTCAAACTTTCTCTTATATTAGAGAAGATGAGACGAGAAATTTTATAAAATCAATTCAGTCATCAGCAGGGTCTTCAGTAAATCTCACTAATAGAATTTTTTCGTTAGTGAGTACTACAGTTTCTAGATCGGCATTTGGTGACAAATCTGAGGATCAAGATGAATTTGTGAATGTGATTAGAAAAGCCATTGAATCTGTTGGAGGACTTGAACCGGCTGATTTGTTTCCTTCGATAAAATCTATAATAAATGCGATAACCCGCTCGAAATCAAAAATGGAGAAAATGCACAAAAAAGCTGACAAAATTATCGAAATTATTGTTAGGAAGCATCAAGATAAGCAAAGAAGGGCAAAAGAAGAAAGAATTAGTGGTGATGATGAAAAGGAAGATCTTGTTGATGTGCTTTTGAGAATCCAAGAAAGTGGAAGCCTTGAAATCCCAATAACAACTAACAACATCAAAGCTGTGATTTTTGATGCATTTGCTGCGGGAACTGACACAACAACATCAACAATAATTTGGGCTATATCAGAGTTGATGAAAAATCCAAGTGTAATGAAAAAGGTACAAGCTGAATTAAGAGAAGCATGCAAAGGAAAGGAAATAATATCTGAAAGTGATATACTTGAACTTCCTTACCTAAAATTAGTTATAAAAGAGACATTAAGGTTACACCCACCTACTCCTTTATTGCTCCCTAGAGAATCCACGGAATTAATCAATATTGATGGATATGATATACCAAAAAAGACCAAAGTCATGATAAATGTATGGGCTATGGCAAGAGATCCTCAATATTGGACCGATGCTGAGATGTTTATTCCAGAAAGATTTGAAGGTAGTTCTATTGATTACAAAGGAAATAATTTTGAGTATATCCCTTTTGGAGCTGGAAGAAGAATCTGTCCTGGCTTGGCGTTTGGTATAGCTGGAATAATGCTTCCTGTGGCTCTATTAGTTTATCATTTCAATTGGGAACTTCCATATCAGATGAAACCTCAAGATTTAGATATGACTGAACATTATGGATTGGCTATCGGAAGAAAAAGTGACCTGTGTTTGATTCCCACGATTTATGATGTTTAA 1518 0.3419 MEVKLSSIVIPFFLFLMLRLLAKHYKQKNYKLPPGPMKLPFIGNLHQIATLGSLPHRAFQQLAKKYGPMVHLKLGEISTIVISSPKLAKEILKTHDVIFANRPQLQAPNIMAYGSIDIAFSPHGDYWRQMRKICMLELLSNKRVQTFSYIREDETRNFIKSIQSSAGSSVNLTNRIFSLVSTTVSRSAFGDKSEDQDEFVNVIRKAIESVGGLEPADLFPSIKSIINAITRSKSKMEKMHKKADKIIEIIVRKHQDKQRRAKEERISGDDEKEDLVDVLLRIQESGSLEIPITTNNIKAVIFDAFAAGTDTTTSTIIWAISELMKNPSVMKKVQAELREACKGKEIISESDILELPYLKLVIKETLRLHPPTPLLLPRESTELINIDGYDIPKKTKVMINVWAMARDPQYWTDAEMFIPERFEGSSIDYKGNNFEYIPFGAGRRICPGLAFGIAGIMLPVALLVYHFNWELPYQMKPQDLDMTEHYGLAIGRKSDLCLIPTIYDV 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00969 505 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 Pfam Cytochrome P450 33 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 PANTHER OS08G0105600 PROTEIN 58 503 - -
Trre10g00969 505 Gene3D Cytochrome P450 25 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 FunFam Cytochrome P450 71D8 25 500 - -
Trre10g00969 505 CDD CYP71-like 65 496 - -
Trre10g00969 505 SUPERFAMILY Cytochrome P450 33 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00969 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00969 Trre-Chr10 7692194 7693889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00969 13 502 Cytochrome P450 AT3G26310 40.964 3.22e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00969 - K15472 gmx:100783298 649.432