Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00934 ATGTTCATAATTTTCTTATTGAGCAAAACAAGAGCACAAAACAACAACACAATCTGTTTGAATCGTTGTGGAGATGAAATTCTTGATTACCCTTTTGGATTTTCTGATGGTTGTGGAATCAAACTAAACTGTATTGATAACAAAGTTCAAATTCATGAGTTTCTGATTCAGAATATAACCAAAAACAGTATATTAATCTATCTTCCTGCAAAATGCAACCGTAGTATTCAATCTATTCAACCACTTTTCAGTGACAATTTTGCTCCAACAAGGAACAATAGTTTTCTAGTTCAAGATTGTTCAGCTCCTTTAGGTGGATGTGTGATTCCAGCTTCAAGTTTTGTTGGAAATCAAATTGAAGTTGAAAGCTGTGACAGAAAAAGTAGTAACATTAGTTGTTTTAATCAGCAATACCATGAGGGAGATGTTGATGTTTTGTCGTACGAGGAATTGAATAAAACTAGGTGTAACTATTTGTTCTCAGCTGTTGCTGTTCAACAAAGAAATGATTATGGATTTCGGTGTCAGTGTTTGGATGGTTTCCGGGGAGATGGATTTGCCAACGGTACCGGTTGCCGGAGAGCTCCAAGTTGCAGTGCTTCAACACTAACATCCGGGGGATGTGGGAGTGCAACCAAAATCGGCGCTGTTGTCGGAGTGGCCGTAACCGGAGTTGTGATCGTGGCTGCTCTCATTATTTTGTGCTTCTGTGCTAGGCGACGTTTTACTTGGTTGAGAAAACATACCAGAGTAAAGCGCCTACTACGTGAAGCTGCAGGAAACTCTATTGTGCCTCTCTACTCTTACAAAGACATAGAAAAAGCCACAAACTCTTTCTCTGATAAACAGAGGTTGGGAACCGGGGCATTCGGTACAGTCTATTCTGGAAAACTTCACAATGATGAGTTTGTTGCAATAAAGAAGATAAGGCATAGAGATACAAACAGTGTTGATCAAGTCATGAATGAGATCAAGCTCCTTTCTTCGGTGAGTCACCCAAATTTGGTTCGCCTCCTAGGTTGCTGCATTGAGGAGGGAGAGCAGATACTTGTTTATGAATATATGCCAAATGGAACGTTGTCTGAGCATTTGCAAAGAGAGAGAGGCTTGGCATGA 1116 0.4014 MFIIFLLSKTRAQNNNTICLNRCGDEILDYPFGFSDGCGIKLNCIDNKVQIHEFLIQNITKNSILIYLPAKCNRSIQSIQPLFSDNFAPTRNNSFLVQDCSAPLGGCVIPASSFVGNQIEVESCDRKSSNISCFNQQYHEGDVDVLSYEELNKTRCNYLFSAVAVQQRNDYGFRCQCLDGFRGDGFANGTGCRRAPSCSASTLTSGGCGSATKIGAVVGVAVTGVVIVAALIILCFCARRRFTWLRKHTRVKRLLREAAGNSIVPLYSYKDIEKATNSFSDKQRLGTGAFGTVYSGKLHNDEFVAIKKIRHRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEEGEQILVYEYMPNGTLSEHLQRERGLA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00934 371 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 135 367 - -
Trre10g00934 371 FunFam Wall-associated receptor kinase-like 14 246 354 - -
Trre10g00934 371 ProSiteProfiles Protein kinase domain profile. 279 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g00934 371 Gene3D Phosphorylase Kinase; domain 1 242 354 - -
Trre10g00934 371 ProSitePatterns Protein kinases ATP-binding region signature. 285 308 IPR017441 GO:0005524
Trre10g00934 371 SUPERFAMILY Protein kinase-like (PK-like) 255 368 IPR011009 -
Trre10g00934 371 Pfam Protein tyrosine and serine/threonine kinase 282 367 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00934 Trre-Chr10 7403050 7406257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00934 11 369 Receptor kinase-like Gene Family AT2G23450 48.030 1.04e-110 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trre10g00934 PK_Tyr_Ser-Thr 5.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00934 - - gmx:100779130 479.174