Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00931 ATGGCTGATTCCACTCCAACTGCATCTACTTCTAATGGCACCCCCACATATTCTTGTTTCCAACGAACGGTTACTCTATACGATTGGTGGCTCGTTAAATCTCAAAACAACATCCAAGGAAACTGTTTAGCCATCTCTGGCGTCTCTTCCAGAAAGGAAGAAGCAGTTCGTGTGTTCAATTCTGCTCCTATTATCAAAAGATTTGATGAGTTTTCCCTTGAGACTGCCGATGGTATATATGTTGTCATTAGGGGTTTCATCAACGAGCAACGCACGCTGGATAATGGTTTTACTTCCAAGATTTTCAAGAGTTTTTTATTTGGCTTTCCTCAAAACTGGGAGAGCTGTGCTCTAGGTTGTTTCAGAGAAGAAGAAGCAGAAGCTGGTGCTTATTCGGTCAATGTTATGGATAATGTATCTGCAGTTTTTGAAGAAATCTCGGCTGACGGTGAGGAAAAATCCATTCCCACTTCGCCGATATTGCCTGAAGAGGCCCCAGAAAAGGGGATGAGTGGATTAGATGTTGCTTGTAGCAGGGGTGGAAATAGGCGTCGTAGCAGGTTGCATAATATTAATGTGTGTCAGCGGAAGAAGCAGCATGCATCTAGAAGTCCTCTCAAGTGTCCCAATGAAGAGCTGAGCTATACCTCCAAGGCTGTGGAAAATTGTAATTCGGGTACTGTTGTTCCTGACAATGTATCAACAAATCTTCTAGAAATCCCATCTGATGCCGTGGAAAATTCTTTCCCTACGTCTTTGGTAACACCGGAAAAGGCCATGAAAGATTGCAATAAGTCATTACTTGAAGAGGAACAAGATATGTCAATTAAGATGAGTGATATCAATGTTGTTCATGATAGTGGCGGGAATAGGCGTAGTGGCCGGTTGCATAATGTTAAAGTCTGCCAGAAGCTGCAGCCTGTGTCTGGAGATCCTCTCAAGCATCCAGAGGAAGAGCAGAGCTCTACATTAAAGGCTGTGGAAAATCGTGATTATGATACTGCTGTTCCTGATAACGTATCAGCAAAACTTCCAGAAATACCATATGATGCTGTGGAAAAGTCTTTTCCTACTTCGGTATCACTGGATAAGACCACAGGAGATTGCAATAAGGCATTCCTTGAAGATGAACACAATATGTCAATTAAGACGGGTGAGGTCAATGTTGTTCACGGTAGTGGTGCGAATAGACGTAGTGCCCGGTTGCATAATGTTAAACTCAACCAGAAGAAGCAACCTGCTATTGGAGGTCCTACACCACATCCAGATAAAGACCAGATCTCTGCCTCAGCTGCTCTGGAGAAGAGTGATGGAAGACTGGAAACTCTATCGACACCCGTTCAGTCACAAAAGACAATAGTAAACACATCATCTGGGCAGCTCACTAATAAATTCAGATCCAGAATTTCCAAAACTCCTTCAGCAAAAACTGAAGGATCGAGAATTTCCAAAACACCTTCAGCAAAAACTGAAGGATGTTATAAGAAAAAAAGGGTGATGGTTGAAAGAGAAGCTGTCAGGCCTAAGAGAAAAAGTATTAAATCCGCATCTTCTGTAAAATCTCCACAAGGAAATGATGTAAGCCAACTGAACAAGGGAAGTAAACAGAGATTATCCACAATGTCTCCGGAGTCCTTGAGTCTCAAAAAATCTAGATCTGGTAGGTTACTTCTACCTCCCTTGGAGTTTTGGCGCAATCAAATACCTATTTTTAATGGGGACCATGAAATTACAGAAATTCAGGAAGGCTCGTCCTTGAAATCACCTTTTTGA 1773 0.4224 MADSTPTASTSNGTPTYSCFQRTVTLYDWWLVKSQNNIQGNCLAISGVSSRKEEAVRVFNSAPIIKRFDEFSLETADGIYVVIRGFINEQRTLDNGFTSKIFKSFLFGFPQNWESCALGCFREEEAEAGAYSVNVMDNVSAVFEEISADGEEKSIPTSPILPEEAPEKGMSGLDVACSRGGNRRRSRLHNINVCQRKKQHASRSPLKCPNEELSYTSKAVENCNSGTVVPDNVSTNLLEIPSDAVENSFPTSLVTPEKAMKDCNKSLLEEEQDMSIKMSDINVVHDSGGNRRSGRLHNVKVCQKLQPVSGDPLKHPEEEQSSTLKAVENRDYDTAVPDNVSAKLPEIPYDAVEKSFPTSVSLDKTTGDCNKAFLEDEHNMSIKTGEVNVVHGSGANRRSARLHNVKLNQKKQPAIGGPTPHPDKDQISASAALEKSDGRLETLSTPVQSQKTIVNTSSGQLTNKFRSRISKTPSAKTEGSRISKTPSAKTEGCYKKKRVMVEREAVRPKRKSIKSASSVKSPQGNDVSQLNKGSKQRLSTMSPESLSLKKSRSGRLLLPPLEFWRNQIPIFNGDHEITEIQEGSSLKSPF 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00931 590 MobiDBLite consensus disorder prediction 465 550 - -
Trre10g00931 590 MobiDBLite consensus disorder prediction 311 326 - -
Trre10g00931 590 MobiDBLite consensus disorder prediction 515 549 - -
Trre10g00931 590 MobiDBLite consensus disorder prediction 490 511 - -
Trre10g00931 590 MobiDBLite consensus disorder prediction 308 327 - -
Trre10g00931 590 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 1 583 - -
Trre10g00931 590 Pfam SANTA (SANT Associated) 24 115 IPR015216 -
Trre10g00931 590 MobiDBLite consensus disorder prediction 465 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00931 Trre-Chr10 7379873 7382895 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre10g00931 SANTA 3.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00931 - - mtr:25484135 724.161