Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00928 ATGGATGAATTCCTACTCAAAACTCTCATTTCAAGCATTCTCACCTTGTTAATTGGAGCCTTAATTTATCACATAAAGAAAACACATGGTCATGGCCACACAACTGCACCTCAAGCAGGAGGATCATGGCCTATTATTGGCCATTTGCACCTCTTTGGGACTCAACAACTTAGACACAAAACACTTGGTATGATGGCTGACAAACATGGACCAATTTTCACAATCAAACTTGGTTCATACAAAGTTCTTGTACTTAGTAGCAGTGAAATGGCCAAAGAATGTTTTACTCTCCATGACAAAACATTCTCCACTAGACCCTATGTTGCAGCCTCAAAGCTATTGGGTTACAACTATGCTATGTTTGGATTCACTCCTTATGGTCCTTATTGGCGTGAGATGAGGAAGTTAGCTACACTTGAGCTTCTTTCGAACCACCGACTCGAGCTGTTGAAGTACACAAGAGTATCTGAGTTAGATTCTGCGGTGAGAGAGCTTTATAGGTTATGGACAATAAAGGGTTGTCCAAAAGAAGGTGTTTTGGTTGATATGAAGCAGTGGTTTGGTGATTTGACACAAAATATTGCTCTGAAAATGGTGGGAGGGAAGCCATATTATGGTACTGGTGAAGGTGAAGCTAGGAAGTATAAGGAAGCTATGAGAGATTGGGTGTGTTTGTTTGGTGTGTTTGTTTTGTCTGATGCAATTCCATTTCTGGGTTGGTTAGATATTAATGGTCATGAGAAGGCTATGAAGAAAACTGCTAAGAAATTAGACACTCTGGTTGAAGGGTGGCTAGAGGAACACAAAAAGAGAAGAGCTTTGGGTAAGGATGGAAAGGAAGAACAGGATTTCATGGATATCATGTTGGATGTTCTGCAGGATGCAGAAATTTGTGGTTATGATTCAGATACCATCATCAAAGCTACTTGCCTGAATCTGATTTTAGCAGGAAGTGACACCATCATGGTGGCTCTAATATGGGCACTGTCCCTATTACTCAATCATCCAATGGAACTTAAAAAGGTACAGGATGAGTTGAACACACATATTGGGAAGGACATGAAAGTGGAAGAATCTGACATAAAGAACTTAGTCTACCTCCAAGCCATTGTCAAGGAAACGATGCGCCTCTATCCACCAAGTCCAATTATCGTCTTGCGCTCAGCAATGAATGACTGCACTTTTTCATGTGGCTATCACATTCCTGCTGGTACACAGTTGATGGTGAATACTTGGAAGATCCACAGGGACAGTCGTGTTTGGACTGATCCTCATGATTTCAAGCCTGAGAGGTTTTTAACAAGCTACAAAGATGTTGATGTGAGAAGTCAAAACTATGAGCTTGTCCCTTTTGGTTCTGGAAGGAGAGTGTGCCCTGGGGCCTCACTGGCTATGAGAGTGGTGCACTTGACATTGGCTAGACTGCTACACTCTTTCGATGTTGCTACTCCTTCAAATCAAGCTGTAGACATGACAGAAAGCCCTGGACTCACTAATTTAAAAGCAACCCCACTTGAAGTTGTATTAACACCGCGCCTAGATACCAATCTTTATGAGTAG 1560 0.4179 MDEFLLKTLISSILTLLIGALIYHIKKTHGHGHTTAPQAGGSWPIIGHLHLFGTQQLRHKTLGMMADKHGPIFTIKLGSYKVLVLSSSEMAKECFTLHDKTFSTRPYVAASKLLGYNYAMFGFTPYGPYWREMRKLATLELLSNHRLELLKYTRVSELDSAVRELYRLWTIKGCPKEGVLVDMKQWFGDLTQNIALKMVGGKPYYGTGEGEARKYKEAMRDWVCLFGVFVLSDAIPFLGWLDINGHEKAMKKTAKKLDTLVEGWLEEHKKRRALGKDGKEEQDFMDIMLDVLQDAEICGYDSDTIIKATCLNLILAGSDTIMVALIWALSLLLNHPMELKKVQDELNTHIGKDMKVEESDIKNLVYLQAIVKETMRLYPPSPIIVLRSAMNDCTFSCGYHIPAGTQLMVNTWKIHRDSRVWTDPHDFKPERFLTSYKDVDVRSQNYELVPFGSGRRVCPGASLAMRVVHLTLARLLHSFDVATPSNQAVDMTESPGLTNLKATPLEVVLTPRLDTNLYE 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00928 519 FunFam Cytochrome P450 82C4 26 510 - -
Trre10g00928 519 SUPERFAMILY Cytochrome P450 42 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 Pfam Cytochrome P450 37 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Trre10g00928 519 PANTHER CYTOCHROME P450 82C3-RELATED 14 518 - -
Trre10g00928 519 Gene3D Cytochrome P450 27 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00928 519 CDD CYP82 70 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00928 Trre-Chr10 7364074 7365926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00928 8 518 Cytochrome P450 AT4G31940 50.575 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00928 - - gmx:606549 827.394