Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00913 ATGGCAAGGATCAAGGTTCATGAGTTGAGGCAGAAAACCAAAGCTGATCTCTTGGCTCAGCTCAAAGACCTCAAGGTTGAACTCGCCTTGCTCCGTCTTGCTAAGGTCACCGGTGGTGCACCTAACAAGCTCTCCAAGATTAAGGTGGTGAGGCTTTCTATTGCTCAGGTTTTGGCCGTGATTTCTCAGAAGCAAAAGGCTGCATTGATGGAAGTTTACAAAACAAGAAGTATTTGCCACTTGATCTTCGCCCAAAGAAGACCAAAGCCATTCGCAGAAGACTCACCAAGCACCAGGCATCATTGA 306 0.4706 MARIKVHELRQKTKADLLAQLKDLKVELALLRLAKVTGGAPNKLSKIKVVRLSIAQVLAVISQKQKAALMEVYKTRSICHLIFAQRRPKPFAEDSPSTRHH 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00913 101 PANTHER 60S RIBOSOMAL PROTEIN L35 1 78 IPR045059 GO:0000463|GO:0022625
Trre10g00913 101 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Trre10g00913 101 FunFam 60S ribosomal protein L35 1 77 - -
Trre10g00913 101 NCBIfam 50S ribosomal protein L29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Trre10g00913 101 Coils Coil 14 34 - -
Trre10g00913 101 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Trre10g00913 101 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Trre10g00913 101 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00913 Trre-Chr10 7224506 7224811 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00913 1 89 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 73.034 5.13e-37 119