Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00912 ATGGCAAGGATCAAGGTTCATGAGTTGAGGCAGAAAACCAAAGTTGATCTCTTGACTCAGCTCAAAGACCTCAAGACTGAACTCGCCTTGCTCTGTATTGCTAAGGTCACCGGTGGTGCACCTAACAAGCTCTCCAAGATTATGGTGGCGATGCTTTCTATTGCTCAGAAGCTTTGTTGGGATTCACAAATCAAAGGAAAGTTTTGTGGAAACATCTTCTTTGTTACTGTCTCTAAAACTCCCAACTTGAAGGGCATTGTACAGACACTATTTGAACACTGTGTACTTCGGGTGCCTGAGTTTCATAGCGACGAAGATGCAATTAACCCGATTGGGAGTTCTGCTGGGGCGAATTATAAGATTTTGGTGACTTCAAGGGTTGCATTTAGAAGATTTGGCACCCCATTCCCATTGCATCCACTTGATCATGATCATGCTGTGTCCCTTTTCCATCACTTTGCTCAATTGAATCACAACAGCTCATACATGCCGGATAAAAATCTTGTCCGTGAGGTATATTGGCTGAAAAATACTGTAATGCCACCTGTAGCTGTGGGAGTGCCAAGTTGCAATGCTTCAGCAGGAAAGAGGAAAAGTAAAGCATTGCATGCTGGCGGACTGGGTGAAAAACCCACTTCTGGAGTTGCTCAGATCAAAAGCAGAATACTAGATGAGAATGAAAAGGAGAAGAAAATAGAGTGA 702 0.4345 MARIKVHELRQKTKVDLLTQLKDLKTELALLCIAKVTGGAPNKLSKIMVAMLSIAQKLCWDSQIKGKFCGNIFFVTVSKTPNLKGIVQTLFEHCVLRVPEFHSDEDAINPIGSSAGANYKILVTSRVAFRRFGTPFPLHPLDHDHAVSLFHHFAQLNHNSSYMPDKNLVREVYWLKNTVMPPVAVGVPSCNASAGKRKSKALHAGGLGEKPTSGVAQIKSRILDENEKEKKIE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00912 233 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 54 172 IPR039203 GO:0050832
Trre10g00912 233 MobiDBLite consensus disorder prediction 198 233 - -
Trre10g00912 233 FunFam 60S ribosomal protein L35 1 64 - -
Trre10g00912 233 SUPERFAMILY Ribosomal protein L29 (L29p) 4 57 IPR036049 GO:0003735|GO:0005840|GO:0006412
Trre10g00912 233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 163 IPR027417 -
Trre10g00912 233 Pfam Ribosomal L29 protein 8 55 IPR001854 GO:0003735|GO:0005840|GO:0006412
Trre10g00912 233 Gene3D - 1 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Trre10g00912 233 NCBIfam 50S ribosomal protein L29 8 50 IPR001854 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00912 Trre-Chr10 7215487 7218311 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00912 1 63 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 73.016 1.36e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00912 - K02918 mtr:11405852 178.333