Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00888 ATGGAGTGTGTCTTTAACAAACATTTTTATGTTTTTATGTTTTATCTTGTGTTTCTTACTCCACTTGTGTGCTCTCAACTTGATTACAACTTCTATATCAAAACTTGTCCAAACCTAAACAAAATTGTTAAAGATAATGTATTGTCAGCCATAACCAATGACTCAAGGATTGCTGCATCTCTCCTTCGTCTTCATTTCCATGATTGTTTTGTTAATGGGTGTGATGGATCTGTGCTACTGGATGATACGGACACACTAAAAGGGGAGAAAAATGCACTGCCTAATAAAAATTCATTAAGAGGATTTGATGTAATTGATAAGATAAAGTCTGATTTAGAGAATGCTTGTCCATCTATAGTGTCATGTGCAGATATACTTGCTCTAGCAGCCAGAGAAGCTGTGTATCTAAGTAGGGGGCCATTTTGGTTTGTACCACTTGGTCGTAGAGATGGCACAACAGCAAGTGAGAGTGAGGCAAATAACTTGCCATCACCTTTTGATACTTTAGATAAAATTACTGCTAAGTTCATTTCCAAGGGTCTTGACAAGAAGGATGTAGCAGTTCTCTCAGGTGCACACACTTTTGGCTTCGCTCAATGTGTTACATTCAAGACAAGGCTATTCAACTTTAATGCCTCTTTCAAATCTGATCCATCACTTGATTCATCCCTTCTACAAAATTTGCAAAAATTATGTCCAAATGAAGCTAATTCCGACACCAATTTAGCACCCTTGGATCCTGTCACTACAAACATATTTGATAACACATATTACAAAAATGTTTTAAGCAATTCTGCGTTACTTCAATCAGATCAAGCTCTTTTGGGTGACAATACAATTGTTTCCTTGGTTACCAACTATAGCAAGTGCCCTTTTGAGTTTTTTAGAGACTTTGCGGTTTCTATTGAGAAAATGGGTCGCATTGGGGTTCTTACAAGACAACAGGGTCAAATAAGGAAAAATTGTAGGGTTGTTAACTAA 981 0.368 MECVFNKHFYVFMFYLVFLTPLVCSQLDYNFYIKTCPNLNKIVKDNVLSAITNDSRIAASLLRLHFHDCFVNGCDGSVLLDDTDTLKGEKNALPNKNSLRGFDVIDKIKSDLENACPSIVSCADILALAAREAVYLSRGPFWFVPLGRRDGTTASESEANNLPSPFDTLDKITAKFISKGLDKKDVAVLSGAHTFGFAQCVTFKTRLFNFNASFKSDPSLDSSLLQNLQKLCPNEANSDTNLAPLDPVTTNIFDNTYYKNVLSNSALLQSDQALLGDNTIVSLVTNYSKCPFEFFRDFAVSIEKMGRIGVLTRQQGQIRKNCRVVN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00888 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Trre10g00888 326 FunFam Peroxidase 163 305 - -
Trre10g00888 326 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PANTHER PEROXIDASE 72-RELATED 24 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 Gene3D - 30 326 - -
Trre10g00888 326 Gene3D Peroxidase, domain 2 163 305 - -
Trre10g00888 326 FunFam Peroxidase 30 176 - -
Trre10g00888 326 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601|GO:0042744
Trre10g00888 326 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Trre10g00888 326 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00888 326 Pfam Peroxidase 44 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00888 Trre-Chr10 6964840 6966858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00888 23 322 Peroxidase AT1G49570 61.056 7.53e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00888 K00430 - gmx:100786765 496.123