Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00870 ATGGAGATTTCTCAGGTAGGTGTCAGGACACGATCTCGAGCTGCATTAGCAATGGAAGAAGAAGCTACAAGCTCAGCCGTACAACTAATTCCAAAGAGAAGAAAGATCAACAACAGAAAAGAAAACCGTAAATTATCAAAAAAGTCACCGACGGTTTTACCGGAACCGGAACCTTCCTCCGGTTCTATCTCCGACGAAGAATTTCCGGCGTCGTGTTGTTCAAGCAATGGATCCGTTGGAATCACTGAAGAAAGGATCAAATCGTTAGATCTAGAGGTGGAGAGAGCGCAAGTTGAAACGTCGACGTGCAACTGCGGTGAAGAAGAAACACAGAGGAGAGAGATGAATCGTTCAAGCGAGTATCAAGGAAATTCTCAAGAGCTTGAGTCAATGGAGACAAATTCTCACCGTCAAAATTCATCTCCGAAAAATATGCCAACGGAATTTGAACTTGATGAATTTTTCTCTGCTGCAGAGAAAAACATTCAGAAAAAGTTTCAAGAAAAGTATAATTATGATATTGTGAAGGACGTTCCATTGGAAGGACGCTATGAGTGGGTTCAGTTGAAGCCATGA 576 0.4219 MEISQVGVRTRSRAALAMEEEATSSAVQLIPKRRKINNRKENRKLSKKSPTVLPEPEPSSGSISDEEFPASCCSSNGSVGITEERIKSLDLEVERAQVETSTCNCGEEETQRREMNRSSEYQGNSQELESMETNSHRQNSSPKNMPTEFELDEFFSAAEKNIQKKFQEKYNYDIVKDVPLEGRYEWVQLKP 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00870 191 Coils Coil 79 99 - -
Trre10g00870 191 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 5 190 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trre10g00870 191 MobiDBLite consensus disorder prediction 117 146 - -
Trre10g00870 191 Gene3D p27 107 191 IPR044898 -
Trre10g00870 191 MobiDBLite consensus disorder prediction 1 77 - -
Trre10g00870 191 PIRSF CKI_KRP_plant 3 191 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trre10g00870 191 MobiDBLite consensus disorder prediction 53 77 - -
Trre10g00870 191 Pfam Cyclin-dependent kinase inhibitor 145 189 IPR003175 GO:0004861|GO:0005634|GO:0051726
Trre10g00870 191 MobiDBLite consensus disorder prediction 97 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00870 Trre-Chr10 6795442 6796538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00870 112 191 Core Cell Cycle Gene Families AT1G49620 51.765 2.17e-20 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00870 - - tpra:123908811 335.495