Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00864 ATGGCCACCACTCCCCCTTCCTCCTCACCACCAAAACTCATCGCTACCGTTTCCTCTCTCACAAAAAAACCCCAACCCATCCCATGGACTCACCAAGAAACCATTAACCTCATCAGAGCTTATCAAGAGAAATGGTACTCTCTCAAACGTGGTCCACTTCGCGGCAGTCAATGGGAAGAAGTTGCTGTTGTAGTCGCCGCTAGATGTGGTTACGATTACAATCATCCTTCTAAAACTGCTCTTCAATGTCGTCATAAGATGGAAAAACTCCGTCAACGTCACCGATCTGAAAAGCACCGTCTCACTGCTACTTCCTCCGCTGTTTCTTCCCGATCTTGGCAGTATTTTCGTCTTATGGATGATCTTGAACGTGGTCCTCTTCCTATCTCAGCTCGACCTGTTCTTCATAATTTCCCTATCTCTGATGATGATGATAGTGATGGTGAGAGACGGAAAAAGCGTAGTGTTAGGTCAAGGAGTATGAATAATATTCTTAACCAGAAACCAGTTCTTACAAGACAACGTGTTGAAATTGATGATGATGATGAGGAGGAGGAAGACGAGGATGATGATGAAGAGGAAGAAGAAGGAGTGATGATGGTGAAGGGGTTGACGGCGGAGTTAAGAGGTTTTGCTGAGAGGATTGTTGGGTTGGAAAATAGGAAGATGGAGATGATGAAAGAAACTGAGAGATTTAGGTTGGAGATGGAGAATAAGAGGCTTCGTATGATACTTGAATCTCAGTGGAAGATTGTTGATTCCATTGGAAAAGCATTTGGGTCTTCTTAG 789 0.4411 MATTPPSSSPPKLIATVSSLTKKPQPIPWTHQETINLIRAYQEKWYSLKRGPLRGSQWEEVAVVVAARCGYDYNHPSKTALQCRHKMEKLRQRHRSEKHRLTATSSAVSSRSWQYFRLMDDLERGPLPISARPVLHNFPISDDDDSDGERRKKRSVRSRSMNNILNQKPVLTRQRVEIDDDDEEEEDEDDDEEEEEGVMMVKGLTAELRGFAERIVGLENRKMEMMKETERFRLEMENKRLRMILESQWKIVDSIGKAFGSS 262
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00864 262 MobiDBLite consensus disorder prediction 178 197 - -
Trre10g00864 262 MobiDBLite consensus disorder prediction 138 154 - -
Trre10g00864 262 Gene3D - 29 96 - -
Trre10g00864 262 SMART 118neu2 36 127 IPR006578 -
Trre10g00864 262 Coils Coil 201 221 - -
Trre10g00864 262 FunFam Trihelix transcription factor ASIL2 29 96 - -
Trre10g00864 262 ProSiteProfiles Myb-like domain profile. 28 91 IPR001005 -
Trre10g00864 262 Pfam Myb/SANT-like DNA-binding domain 28 122 IPR044822 -
Trre10g00864 262 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 20 254 IPR044823 -
Trre10g00864 262 MobiDBLite consensus disorder prediction 133 197 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre10g00864 Trre-Chr10 6733585 6734373 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00864 29 141 Trihelix Transcription Factor Family AT3G14180 29.752 1.62e-10 58.9
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre10g00864 Myb_DNA-bind_4 1.5e-16 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00864 - - mtr:11405483 365.925