Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00834 ATGGGTTGGGTTCGTGGTCAGTTGTTAGGCAGCGGAAGCTTTGCCACCGTCAACTTAGCTACACACACAAACAATTCCGATAAATTTCCCTCTATCACCGCCGTCAAATCCTCCGATACTTACTATTCTCATCTTCTCCATAATGAGAAACAAATACTCGATCATTTAGGATCTTCTCTGCATGTTATCAATTGTTTTGGCGATGATCACACTATCGAAGACGGCGAAGAGTGTTATAATATCTTTCTAGAATATGCCGCCGGTGGTACTCTCTTTGATCAACTCAAGAATTACGGTGGTAAGTTACCAGAAACCCTCGTTCGTCGTTACACGAGGTCTATCCTTGAAGGACTTAAACATGTTCATGAAAACGGTTTTGTTCACTGTGACGTGAAGCTACAAAACATTCTTGTATTTGAAGATGGTAACGTTAAGATTTCGGATTTTGGTCTTGCAAAGGAGAAAGGTTTGAAGAACAATGGAAAATTGGAATGCAGGGGAACTCCGATGTTTATATCGCCGGAAGCAGTGAACGATAGTGTTTATGAATCGCCGGCAGACATATGGGCACTTGGTTGCGCGGTAGTAGAGATGTTTACGGGAAAACCTGCATGGAATTTTAGTGGGACGAATATATGGTCCTTGTTGATTAGAATTGGGGTAGGAGAAGAATTGCCGTTGATTCCAAAAGAGTTGTCACAAGAAGGAAAAGATTTTCTTCAAAAAATATTCGTGAAGGATCCGTTGAAAAGATGGACCGCAGAGATGCTTTTGAAACACCCTTTTATCTTTGAAGATAAAAATGTTTCATTGGTGAAAGAGTTAACTAATGAGTCGTCGTCAATGCCATCACCGTCATCTCCAAGAACACACTTTGATATTTCTACAGAATTTGAGAATGATTTTTGTTCGCCGGAAGAGAGGCTTCAACGACTAGTCGAAGATCAAAGATTTGTTAGATTGGTTAGAATCTGA 975 0.4051 MGWVRGQLLGSGSFATVNLATHTNNSDKFPSITAVKSSDTYYSHLLHNEKQILDHLGSSLHVINCFGDDHTIEDGEECYNIFLEYAAGGTLFDQLKNYGGKLPETLVRRYTRSILEGLKHVHENGFVHCDVKLQNILVFEDGNVKISDFGLAKEKGLKNNGKLECRGTPMFISPEAVNDSVYESPADIWALGCAVVEMFTGKPAWNFSGTNIWSLLIRIGVGEELPLIPKELSQEGKDFLQKIFVKDPLKRWTAEMLLKHPFIFEDKNVSLVKELTNESSSMPSPSSPRTHFDISTEFENDFCSPEERLQRLVEDQRFVRLVRI 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00834 324 ProSiteProfiles Protein kinase domain profile. 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g00834 324 Gene3D Transferase(Phosphotransferase) domain 1 3 320 - -
Trre10g00834 324 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 290 - -
Trre10g00834 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Trre10g00834 324 Pfam Protein kinase domain 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g00834 324 SMART serkin_6 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g00834 324 SUPERFAMILY Protein kinase-like (PK-like) 3 292 IPR011009 -
Trre10g00834 324 CDD STKc_MAPKKK 3 263 - -
Trre10g00834 324 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00834 Trre-Chr10 6360999 6361973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00834 1 313 MAP Kinase Kinase Kinase AT3G50310 52.121 1.97e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trre10g00834 Pkinase 4.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00834 - - gmx:100782937 433.335