Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00814 ATGGCATCGAAGTCTCCGCCTCAACCTTCCCCGTCTTCTTCTTCTAGATCCAACCCTCCTCTCGAAGCTTCCACAAAGAAATTGGAAGACGCAAGTCCTGCAGTAAAAGATGTGTTATCGGTTATCGAATCTTTGAAGAAACAAGTCGCTGCGAAACGAGTTGTTACTGTTAAGAATAGAGTGGAGGAAAATAGACAGAAGCTGATCGGTATCACGAATCAGCTATGGAAATCGTCGGATGAGAGAAGGACATGCGGCATTGCTGATGGTGATAATAGAAGTCTGGACTTGCTGTCTAAGAGGCAAAAAGAAGCAATTGATGCACTCAATGGTGTTTGTGACGATGATAGGGGGAGCAATGGTTATGATGGAGACGACCATGGTTCTACGGCAGTTCTTCTAGGGTCTAATGTTGCTGTAAAGAACGCTGTTCGGCCTATTAAATTACCTGAAGTGAAAAGATTGCCTCCTTACACTACATGGATATTTTTGGACAGAAATCAAAGAATGACAGAGGATCAGTCAGTTGTTGGTCGTAGGCGAATTTATTATGATCAAACTGGTGGCGAAGCACTTATTTGTAGTGACAGTGAGGAGGAACTAATTGACGAAGAAGAGGACAAAAGAGAGTTTGTAGAACCAGAAGATTTTATACTTCGCATGACTATCAAAGAATATGGTTTATCTGATGCTGTTTTGGAGTCACTGGCTCAGTGTTTTTCAAGAAAAACTAGTGACATTAAGGCCAGATATGAAACTTTTTGCAATGAAGACAATACTGGCGAGGATTCTAAAAGTGGAGATACACAAGATAATTTCCAAATTGACAATTCTTTTCTAGAAAAGGATCTTGAAGCGGCTCTTGACTCTTTTGACAACCTCTTTTGCCGCCGATGTCGTGTTTTCGATTGCAGATTACATGGATGCTCTCAAGATCTTGTCTTCCCGGCTGAGAGACAACCTTCGTGGAGTCCTCCTAATACTGAAAATGCACCATGTGGACCAAATTGTTTTCTATTGGCACTTAAGGCAGAAAAAATGGCCAAAGTTGCATCTTCTGCTCAGACCGATGTTGAAGACAAATCTTCTGGAAGTGCTCTATCTAGGAAAAAATCCTCTGGTAGAAGGCGGATAAAATACACCCAAAGTGAAAATGCTTCATCTAATGCTAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGGGATGCTGTTTCAGCCTCCCACTCAGCCCCACCTAAAACTAAACCAGTGGGGAGAAGTGGAATTGGCAAGAGAAACAGTAAGCGAGTGGCAGAACGCGTTCTAGTTTGCATGCAGAAACGGCAGAAGAAGAATGCAGCTTCTGATTCTGATTCCATTAGTGAAGCACCGGACCGCTCATTGAATGATATGGTTACTGATTCACATGTCATGATTGGGGAAGACAACATGAGGAAAGAAGAGTTTGTGGATGAAAACATTTGTAAACAAGAATTGACAGATAATAAATCTTGGAAAGCTCTTGAAAAAGGGCTTTTAGAAAAAGGAATGGAAATTTTTGGCAAAAACAGCTGCTTAATAGCCAGGAATCTCTTAAATGGTCTAAAGACGTGTTGGGATGTTTTCCAGTACATAAATTGTGAAGAAGGGAAGTTGTCTGGTTCTACTGGGGATGCTATTAATTCTATTGTAGAAGGCTATTCTAAGGGTAATAACGAAGTGAGAAGAAGATCAAAATTTTTACGAAGAAGAGGAAGAGTCCGTCGTTTAAAGTATAGCTGGAAATCTGCTGCTTATCATTCATTCAGGAAAAGGATTACAGACAAAAAGGATCAGCCCTGCCGACAGTATAATCCATGTGGATGTCAATCAGCTTGTGGAAAGGAGTGTCCTTGTCTTTTAAATGGAACCTGCTGTGAGAAGTACTGTGGGTGCCCCAAGAGTTGTAAAAATCGATTTCGTGGCTGTCATTGTGCGAAGAGTCAATGCAGAAGTCGTCAGTGTCCATGCTTTGCTGCCGATAGGGAATGCGATCCAGATGTTTGTAGGAACTGTTGGGTGAGCTGCGGCGATGGCACTCTTGGGATTCCTAGTCAAAGAGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAAGGTTCTTCTTGGACGGTCTGATGTGTCTGGCTGGGGGGCCTTCTTAAAGAATAGTGTTGGTAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCTCACAGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTCGTTCTTGATGCTTATAGAAAGGGTGATAAATTGAAGTTTGCAAACCACTCTCCTGTTCCAAATTGTTACGCGAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGAATATTTGCCAAGGAACGGATTAATGCTGGAGAGGAGCTATTTTATGATTACCGCTATGAGCCCGATAGAGCTCCTGCTTGGGCTCGGAAGCCAGAGGCACCTGGATCGAAAAAAGAAGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2592 0.4213 MASKSPPQPSPSSSSRSNPPLEASTKKLEDASPAVKDVLSVIESLKKQVAAKRVVTVKNRVEENRQKLIGITNQLWKSSDERRTCGIADGDNRSLDLLSKRQKEAIDALNGVCDDDRGSNGYDGDDHGSTAVLLGSNVAVKNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQTGGEALICSDSEEELIDEEEDKREFVEPEDFILRMTIKEYGLSDAVLESLAQCFSRKTSDIKARYETFCNEDNTGEDSKSGDTQDNFQIDNSFLEKDLEAALDSFDNLFCRRCRVFDCRLHGCSQDLVFPAERQPSWSPPNTENAPCGPNCFLLALKAEKMAKVASSAQTDVEDKSSGSALSRKKSSGRRRIKYTQSENASSNAKNISESSDSENGPGRDAVSASHSAPPKTKPVGRSGIGKRNSKRVAERVLVCMQKRQKKNAASDSDSISEAPDRSLNDMVTDSHVMIGEDNMRKEEFVDENICKQELTDNKSWKALEKGLLEKGMEIFGKNSCLIARNLLNGLKTCWDVFQYINCEEGKLSGSTGDAINSIVEGYSKGNNEVRRRSKFLRRRGRVRRLKYSWKSAAYHSFRKRITDKKDQPCRQYNPCGCQSACGKECPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQKVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPVPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEAPGSKKEDGAPSSGRAKKLA 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00814 863 MobiDBLite consensus disorder prediction 443 464 - -
Trre10g00814 863 MobiDBLite consensus disorder prediction 837 863 - -
Trre10g00814 863 MobiDBLite consensus disorder prediction 1 22 - -
Trre10g00814 863 Pfam CXC domain 652 683 IPR041355 -
Trre10g00814 863 MobiDBLite consensus disorder prediction 837 856 - -
Trre10g00814 863 Gene3D SET domain 614 831 IPR046341 -
Trre10g00814 863 SMART CXC_2 648 685 IPR033467 -
Trre10g00814 863 CDD SET_EZH 714 830 - -
Trre10g00814 863 ProSiteProfiles SET domain profile. 714 829 IPR001214 GO:0005515
Trre10g00814 863 MobiDBLite consensus disorder prediction 1 33 - -
Trre10g00814 863 ProSiteProfiles CXC domain profile. 600 699 IPR026489 -
Trre10g00814 863 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 32 861 IPR045318 GO:0006338|GO:0042054
Trre10g00814 863 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 863 IPR025778 GO:0031519
Trre10g00814 863 MobiDBLite consensus disorder prediction 379 406 - -
Trre10g00814 863 MobiDBLite consensus disorder prediction 353 430 - -
Trre10g00814 863 FunFam Putative histone-lysine N-methyltransferase EZH2 614 831 - -
Trre10g00814 863 SMART set_7 714 835 IPR001214 GO:0005515
Trre10g00814 863 Pfam SET domain 725 828 IPR001214 GO:0005515
Trre10g00814 863 SUPERFAMILY SET domain 605 834 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00814 Trre-Chr10 6204373 6213412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00814 703 832 C2H2 Transcription Factor Family AT2G23740 27.891 7.97e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre10g00814 SET 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00814 - K11430 gmx:100809840 1431.39