Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00813 ATGGCATCGAAGTCTCCGCCTCAACCTTCCCCGTCTTCTTCTTCTAGATCCAACCCTCCTCTCGAAGCTTCCACAAAGAAATTGGAAGACGCAAGTCCTGCAGTAAAAGATGTGTTATCGGTTATCGAATCTTTGAAGAAACAAGTCGCTGCGAAACGAGTTGTTACTGTTAAGAATAGAGTGGAGGAAAATAGACAGAAGCTGATCGGTATCACGAATCAGCTATGGAAATCGTCGGATGAGAGAAGGACATGCGGCATTGCTGATGGTGATAATAGAAGTCTGGACTTGCTGTCTAAGAGGCAAAAAGAAGCAATTGATGCACTCAATGGTGTTTGTGACGATGATAGGGGGAGCAATGGTTATGATGGAGACGACCATGGTTCTACGGCAGTTCTTCTAGGGTCTAATGTTGCTGTAAAGAACGCTGTTCGGCCTATTAAATTACCTGAAGTGAAAAGATTGCCTCCTTACACTACATGGATATTTTTGGACAGAAATCAAAGAATGACAGAGGATCAGTCAGTTGTTGGTCGTAGGCGAATTTATTATGATCAAACTGGTGGCGAAGCACTTATTTGTAGTGACAGTGAGGAGGAACTAATTGACGAAGAAGAGGACAAAAGAGAGTTTGTAGAACCAGAAGATTTTATACTTCGCATGACTATCAAAGAATATGGTTTATCTGATGCTGTTTTGGAGTCACTGGCTCAGTGTTTTTCAAGAAAAACTAGTGACATTAAGGCCAGATATGAAACTTTTTGCAATGAAGACAATACTGGCGAGGATTCTAAAAGTGGAGATACACAAGATAATTTCCAAATTGACAATTCTTTTCTAGAAAAGGATCTTGAAGCGGCTCTTGACTCTTTTGACAACCTCTTTTGCCGCCGATGTCGTGTTTTCGATTGCAGATTACATGGATGCTCTCAAGATCTTGTCTTCCCGGCTGAGAGACAACCTTCGTGGAGTCCTCCTAATACTGAAAATGCACCATGTGGACCAAATTGTTTTCTATTGGCACTTAAGGCAGAAAAAATGGCCAAAGTTGCATCTTCTGCTCAGACCGATGTTGAAGACAAATCTTCTGGAAGTGCTCTATCTAGGAAAAAATCCTCTGGTAGAAGGCGGATAAAATACACCCAAAGTGAAAATGCTTCATCTAATGCTAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGGGATGCTGTTTCAGCCTCCCACTCAGCCCCACCTAAAACTAAACCAGTGGGGAGAAGTGGAATTGGCAAGAGAAACAGTAAGCGAGTGGCAGAACGCGTTCTAGTTTGCATGCAGAAACGGCAGAAGAAGAATGCAGCTTCTGATTCTGATTCCATTAGTGAAGCACCGGACCGCTCATTGAATGATATGGTTACTGATTCACATGTCATGATTGGGGAAGACAACATGAGGAAAGAAGAGTTTGTGGATGAAAACATTTGTAAACAAGAATTGACAGATAATAAATCTTGGAAAGCTCTTGAAAAAGGGCTTTTAGAAAAAGGAATGGAAATTTTTGGCAAAAACAGCTGCTTAATAGCCAGGAATCTCTTAAATGGTCTAAAGACGTGTTGGGATGTTTTCCAGTACATAAATTGTGAAGAAGGGAAGTTGTCTGGTTCTACTGGGGATGCTATTAATTCTATTGTAGAAGGCTATTCTAAGGGTAATAACGAAGTGAGAAGAAGATCAAAATTTTTACGAAGAAGAGGAAGAGTCCGTCGTTTAAAGTATAGCTGGAAATCTGCTGCTTATCATTCATTCAGGAAAAGGATTACAGACAAAAAGGATCAGCCCTGCCGACAGTATAATCCATGTGGATGTCAATCAGCTTGTGGAAAGGAGTGTCCTTGTCTTTTAAATGGAACCTGCTGTGAGAAGTACTGTGGGTGCCCCAAGAGTTGTAAAAATCGATTTCGTGGCTGTCATTGTGCGAAGAGTCAATGCAGAAGTCGTCAGTGTCCATGCTTTGCTGCCGATAGGGAATGCGATCCAGATGTTTGTAGGAACTGTTGGGTGAGCAGCTGCGGCGATGGCACTCTTGGGATTCCTAGTCAAAGAGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAAGGTTCTTCTTGGACGGTCTGATGTGTCTGGCTGGGGGGCCTTCTTAAAGAATAGTGTTGGTAAGCATGAATACCTTGGAGAGTATACTGGAGAGTTAATTTCTCACAGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTCGTTCTTGATGCTTATAGAAAGGGTGATAAATTGAAGTTTGCAAACCACTCTCCTGTTCCAAATTGTTACGCGAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGAATATTTGCCAAGGAACGGATTAATGCTGGAGAGGAGCTATTTTATGATTACCGCTATGAGCCCGATAGAGCTCCTGCTTGGGCTCGGAAGCCAGAGGCACCTGGATCGAAAAAAGAAGACGGTGCTCCTTCAAGTGGTCGTGCAAAGAAGCTTGCTTAA 2595 0.4216 MASKSPPQPSPSSSSRSNPPLEASTKKLEDASPAVKDVLSVIESLKKQVAAKRVVTVKNRVEENRQKLIGITNQLWKSSDERRTCGIADGDNRSLDLLSKRQKEAIDALNGVCDDDRGSNGYDGDDHGSTAVLLGSNVAVKNAVRPIKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQTGGEALICSDSEEELIDEEEDKREFVEPEDFILRMTIKEYGLSDAVLESLAQCFSRKTSDIKARYETFCNEDNTGEDSKSGDTQDNFQIDNSFLEKDLEAALDSFDNLFCRRCRVFDCRLHGCSQDLVFPAERQPSWSPPNTENAPCGPNCFLLALKAEKMAKVASSAQTDVEDKSSGSALSRKKSSGRRRIKYTQSENASSNAKNISESSDSENGPGRDAVSASHSAPPKTKPVGRSGIGKRNSKRVAERVLVCMQKRQKKNAASDSDSISEAPDRSLNDMVTDSHVMIGEDNMRKEEFVDENICKQELTDNKSWKALEKGLLEKGMEIFGKNSCLIARNLLNGLKTCWDVFQYINCEEGKLSGSTGDAINSIVEGYSKGNNEVRRRSKFLRRRGRVRRLKYSWKSAAYHSFRKRITDKKDQPCRQYNPCGCQSACGKECPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSSCGDGTLGIPSQRGDNYECRNMKLLLKQQQKVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPVPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEAPGSKKEDGAPSSGRAKKLA 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00813 864 MobiDBLite consensus disorder prediction 443 464 - -
Trre10g00813 864 FunFam Putative histone-lysine N-methyltransferase EZH2 614 832 - -
Trre10g00813 864 ProSiteProfiles SET domain profile. 715 830 IPR001214 GO:0005515
Trre10g00813 864 MobiDBLite consensus disorder prediction 1 22 - -
Trre10g00813 864 Pfam CXC domain 652 683 IPR041355 -
Trre10g00813 864 SMART set_7 715 836 IPR001214 GO:0005515
Trre10g00813 864 MobiDBLite consensus disorder prediction 838 864 - -
Trre10g00813 864 CDD SET_EZH 715 831 - -
Trre10g00813 864 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 32 862 IPR045318 GO:0006338|GO:0042054
Trre10g00813 864 SMART CXC_2 648 685 IPR033467 -
Trre10g00813 864 MobiDBLite consensus disorder prediction 838 857 - -
Trre10g00813 864 MobiDBLite consensus disorder prediction 1 33 - -
Trre10g00813 864 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 864 IPR025778 GO:0031519
Trre10g00813 864 Gene3D SET domain 614 832 IPR046341 -
Trre10g00813 864 SUPERFAMILY SET domain 605 835 IPR046341 -
Trre10g00813 864 MobiDBLite consensus disorder prediction 379 406 - -
Trre10g00813 864 MobiDBLite consensus disorder prediction 353 430 - -
Trre10g00813 864 Pfam SET domain 726 829 IPR001214 GO:0005515
Trre10g00813 864 ProSiteProfiles CXC domain profile. 600 700 IPR026489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00813 Trre-Chr10 6204373 6213412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00813 704 833 C2H2 Transcription Factor Family AT2G23740 27.891 7.99e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre10g00813 SET 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00813 - K11430 gmx:100809840 1426.77