Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00783 ATGTTCCCTCTCTATCTCCCACTCATCTCTATCTTTTTCCTTATCATCACTTTGAAGTTCTTCATCTACACAACAAGAACCTTCAAAAATCTTCCTCCAGGCCCACAATGTCTTCCTATAATAGGAAATCTTCGTCAACTCAAACAACCACTTCATCGTACTTTCCACACCTTATCACAAAAACATGGCAAACTATTTTCTCTTTGGTTCGGTTCTCGTTTAGTTGTTGTTGTTTCATCTTTAAAAATAGCACAAGAATGTTTCACCAAAAACGACATTATTTTAGCAAACCGACCTCATTTTCTAACCGGCAAATATATTGGCTACAACAATACCACAGTGGTACAATCACCTTACGGTGATCATTGGCGCAATTTGCGCCGTATATTATCAATTGAAATACTCTCATCTCACCGTTTGAATTCTTTTTTAGAAATTCGAACGGATGAGATTATGAGACTAGTACAAAAACTAGCACAAATGTCATACAATGGTTTTTCCGAAGTGGAACTTAGGCCCATGTTTTCGGAAATGACATTTAATACTATAATGAGAATGGTGTCGGGGAAAAGATATTATGGTAATGATTGTGATGTTAGTGATGTTGAGGAAGCAAGGTTGTTTAGAGAGATAATTAAGGAGATTGTTACTTTAGGAGGAGCTAACAACGTTGGTGATTTTTTGGGGTTTTTAAGGTTGTTTGATTTTGATGGTTTGGAAAAGAGGCTTAAGAAGATTAGTAAGAGAACTGATTCTTTTTTACAAGGGCTTATTGATGAGCATCGTCTTGGAAAGAGGAATACTAATACTATGATTGATCATCTCTTAACTCAACAACAATCACAACCTGAATATTATACGGATCAAATCATCAAAGGACTTATTGTGGTCATGTTACTTGCAGGAACAGATACATCATCGGTAACCTTAGAATGGGCCATGTCAAATTTATTAAATCATCCAGAAATATTAAAGAAGGCAAAAAATGAGTTAGACACTCACATAGGACAAGACCACTTAGTAGATGAGTCTGATATTTTAAAGCTTCCTTATCTTCAAAGCATTGTTAATGAGACCCTTAGGCTACATCCAGCAGCTCCATTATTAGTGCCTCATTTGTCTTCAAAAGATTTTACCATAGAGAAATATAATATCCCACAAAACACAATTTTGATGGTCAATGCTTGGGCCATTCATAGAGATCCAAATTTGTGGAGTGATCCTACATGTTTTAAGCCCGAGAGGTTTGAGAAAGAAGGTGGGACAAATAAACTACTTTCATTTGGGCTAGGAAGAAGGGCTTGCCCAGGAGAAAATTTGGCCCAACGCACTGTGAGCCTTACTTTGGGCTTATTAATTCAATGTTTTGAATGGAAACGTATAGCTGAAGAAAAAATTGACATGACCGAAGGAAAAGGACTCACGGTGGGAAAGAAAATTTCCTTCAAAGCAATGTGTAAATTACACCATCCACTTAGAATTAAGAATGTTTTCTAA 1497 0.3634 MFPLYLPLISIFFLIITLKFFIYTTRTFKNLPPGPQCLPIIGNLRQLKQPLHRTFHTLSQKHGKLFSLWFGSRLVVVVSSLKIAQECFTKNDIILANRPHFLTGKYIGYNNTTVVQSPYGDHWRNLRRILSIEILSSHRLNSFLEIRTDEIMRLVQKLAQMSYNGFSEVELRPMFSEMTFNTIMRMVSGKRYYGNDCDVSDVEEARLFREIIKEIVTLGGANNVGDFLGFLRLFDFDGLEKRLKKISKRTDSFLQGLIDEHRLGKRNTNTMIDHLLTQQQSQPEYYTDQIIKGLIVVMLLAGTDTSSVTLEWAMSNLLNHPEILKKAKNELDTHIGQDHLVDESDILKLPYLQSIVNETLRLHPAAPLLVPHLSSKDFTIEKYNIPQNTILMVNAWAIHRDPNLWSDPTCFKPERFEKEGGTNKLLSFGLGRRACPGENLAQRTVSLTLGLLIQCFEWKRIAEEKIDMTEGKGLTVGKKISFKAMCKLHHPLRIKNVF 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00783 498 PANTHER CYTOCHROME P450 82C3-RELATED 13 487 - -
Trre10g00783 498 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 CDD CYP81 63 480 - -
Trre10g00783 498 Gene3D Cytochrome P450 20 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 FunFam Cytochrome P450 family protein 23 492 - -
Trre10g00783 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Trre10g00783 498 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 SUPERFAMILY Cytochrome P450 32 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00783 498 Pfam Cytochrome P450 32 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00783 Trre-Chr10 5926378 5929824 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00783 8 487 Cytochrome P450 AT4G37370 56.522 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00783 K13260 - gmx:100811727 765.763