Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00781 ATGATCCATCTCTATCTCCCACTCATCTCTCTCCTTTTCCTTATCATCACTTTGAAGCTCTTCTTCATCTACACAACAAGAACCTTAAAAAATCTTCCTCCGGGCCCACAATGTCTTCCTATAATAGGAAATCTTCATCAACTCAAACAGCCACTCCATCACACTTTCCACACCTTATCACAAAAACATGGTAAACTATTTTCTCTTTGGTTCGGTTCTCGTCTAGTTGTTGTTGTTTCATCCTTATCAATAGCACAAGAATGTTTTACCAAAGAAAACGACATCATTTTAGCAAATCGACCTCATTTTCTAAGTGGCAAATATGTTGGGTACAATAATACCACGGTGTCACAATCACCTTATGGTGATCATTGGCGCAATTTGCGCCGTATATTATCAATTGAAATACTCTCATCTCATCGTTTGAATTCCTTCATAGAAATTCGAAAGGACGAGATTATGAGAGTAATACAAAAACTAGCACAAATGTCGTACAATGATTTTTCGGAAGTGGAACTTAAACCTATATTTTTGGAAATGACATTTAATATTATAATGAGAATGGTGTCAGGAAAAAGATACTATGGTAATGATTGTGAAGTTAGTGATGTTGAGGAAGCAAAGGTGTTTAGAGAGATAATTAAGGAGTTTGCTATTTTAGGAGGAGCTAACAACATTGGTGATTTTTTGGGGTTTTTAAGGTGGTTTGATTTTGATGGTTTGGAAAAGAGGCTTAAGAAGATTAGTAAGAGAAGTGATTCTTTTTTACAAGGGCTTATTGATGAACATCGTCTTGGAAAGAGGAATACTAATACTATGATTGATCATCTCTTAACTAAGCAACAATCACAACCTGAATATTATACTGATCAAATCATCAAAGGACTTATTGTGGTCATGCTACTTGCAGGATCAGACTCATCATCTGTAACCTTAGAATGGGCCATGTCCAATTTATTAAATCATCCAGAAATATTGAAGAAGGCAAAAAATGAGTTAGACACTTATATAGGACAAGACCACTTATTAGTTGAGCCTGATATTTTTAAACTTCCTTATCTTCAAAGCATTGTTAATGAGACTCTTAGGCTACATCCAGCAGCTCCATTATTAGTGCCTCATTTGTCTTCAAAACAATTTACCATAGATAAATATAATATCCCACATAATACAATTTTGTTAGCCAATGTTTGGGTCATTCATAGAGATCCAAATTTGTGGAGTGATCCTACATGTTTTAAGCCCGAGAGGTTTGAGAAAGAAGATGAGACAAAGAAACTACTTTCATTTGGGCTGGGAAGAAGGACTTGCCCAGGAGAAAATTTGGCCCTACGCAATGTGAGTCTTACTTTGGGGTTATTAATTCAATGTTTTGAGTGGAAATGCATAGGTGAAGAAAAAATTGATATGGCCGAAGCAAAAGGAATTACGGTGGGAAAGAAAATTCCCTTAAAAGCAATGTGTAAACTGCGCCATCCACTAAGGATTAAAGTTGTTTTTTAG 1503 0.356 MIHLYLPLISLLFLIITLKLFFIYTTRTLKNLPPGPQCLPIIGNLHQLKQPLHHTFHTLSQKHGKLFSLWFGSRLVVVVSSLSIAQECFTKENDIILANRPHFLSGKYVGYNNTTVSQSPYGDHWRNLRRILSIEILSSHRLNSFIEIRKDEIMRVIQKLAQMSYNDFSEVELKPIFLEMTFNIIMRMVSGKRYYGNDCEVSDVEEAKVFREIIKEFAILGGANNIGDFLGFLRWFDFDGLEKRLKKISKRSDSFLQGLIDEHRLGKRNTNTMIDHLLTKQQSQPEYYTDQIIKGLIVVMLLAGSDSSSVTLEWAMSNLLNHPEILKKAKNELDTYIGQDHLLVEPDIFKLPYLQSIVNETLRLHPAAPLLVPHLSSKQFTIDKYNIPHNTILLANVWVIHRDPNLWSDPTCFKPERFEKEDETKKLLSFGLGRRTCPGENLALRNVSLTLGLLIQCFEWKCIGEEKIDMAEAKGITVGKKIPLKAMCKLRHPLRIKVVF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00781 500 PANTHER CYTOCHROME P450 82C3-RELATED 14 493 - -
Trre10g00781 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Trre10g00781 500 CDD CYP81 64 484 - -
Trre10g00781 500 Gene3D Cytochrome P450 23 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 FunFam Cytochrome P450 family protein 24 494 - -
Trre10g00781 500 Pfam Cytochrome P450 33 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00781 500 SUPERFAMILY Cytochrome P450 33 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00781 Trre-Chr10 5912849 5915163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00781 8 498 Cytochrome P450 AT4G37370 54.453 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00781 K13260 - gmx:100811727 719.539