Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00750 ATGGAATTCAAAGCTGTTTCTTCAACTTATGCAGATGGATTCGCTTCATTGATCGAACATTTACGCGTGCAAGTGCAACATTATAATAAAATTCATGAAGCATTGGTTATAAACTGTCACATGATGCTTCATTATATTCCTGAAGAAACTCTATACGTGGTTAATGATACTAATACGAATTCAAACTCTTCTTCGTCATTGCGATCAATGTTTCTAGATGCTTTGCGGAGTTTAGATCCAACAATTGTTGTTTTAGTGGAAGAAGACGCGGATTTAACATCGAATGATTTAGTTTGTAGACTAAAATCCGCGTTTAATTATCTTTGGATACCGTACGATACGGTTGACACATTTCTACCACAAGGGAGTAAACAAAGACAGTGGTATGAGGCCGGAATTTGTTGGAAGGTTGAGAATGTGATAGCATATGAAGGGATTGAGAGAATTGAGAGAGTTGAGCCTAAAAACAAGTGGGAACAACGAATGAGAAATGCGCAATTTCAGGGGATTTGTTTCGGTGAGGATTCCATTTTGGAAGTTAAGGCTATGCTTGATGATCATGCAGTTGGATGGGGATTAAAGAAAGAAGATGAGTTTCTTGTGCTTACTTGGAAAGGGAATAATGTTATCTTTGCATCTGCTTGGTTACCTTCTTGA 657 0.376 MEFKAVSSTYADGFASLIEHLRVQVQHYNKIHEALVINCHMMLHYIPEETLYVVNDTNTNSNSSSSLRSMFLDALRSLDPTIVVLVEEDADLTSNDLVCRLKSAFNYLWIPYDTVDTFLPQGSKQRQWYEAGICWKVENVIAYEGIERIERVEPKNKWEQRMRNAQFQGICFGEDSILEVKAMLDDHAVGWGLKKEDEFLVLTWKGNNVIFASAWLPS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00750 218 ProSiteProfiles GRAS family profile. 1 216 IPR005202 -
Trre10g00750 218 Pfam GRAS domain family 18 215 IPR005202 -
Trre10g00750 218 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 205 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00750 Trre-Chr10 5632856 5633512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00750 1 217 GRAS Transcription Factor Family AT3G49950 59.817 1.46e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre10g00750 GRAS 5.1e-41 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00750 - - mtr:11421838 370.163