Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00741 ATGAGTGATGAATCAGTACTTAAAGTTGTTATTAGAGAGTTTGAAGTTAATAAAGACAGAGAAAGAGTTGAAGAAGTTGAAAGGACATGTGAAGTTGGTCCCAGTAACAAACTTTCTCTGTTCACCGACATGCTTGGTGACCCCATTTGCAGACTCCGCCACTCACCTTCTTATCTCATGCTGATTGCTGAAATTGATAAAGAGATAGTGGGAATGATAAGAGGTTGCATCAAAACCGTCACATGTGGTAAAAAATTCTCAAGAAAATCAACTAAACAACACCCTGTTTACAGCAAACTTGCTTACATTTTAGGCCTTCGTGTCACACCTAATCAACGGAGAATGGGAATAGGATTGAAGCTAGTAAAGAAAATGGAGGCATGGTTTAAAGATAACGGCGCTGAATATTCATACATGGCAACAGAAACTGGAAATTTAGCATCTGTTAAACTCTTTACGGAAAAATGTGGTTATTCTAAGTTTCGTACACCGTCAATTCTTGTCAACCCCGTTTTTGCTCATAAAACTAAAATTTCACCAAACGTCACTATCATTCCGTTAACTCCGTCAGATGCCGTTATTCTCTACCGTAACCGTTTTGCAACCACTGAGTTTTTTCCTCACGACATTGATGCCGTTCTTAATAACAAACTTAGTCTTGGTACTTTTCTTGCTGTACCACGTGGGTCCTACAATATTGAAACGTGGCCCGGCCCAGATAGGTTTCTTTTGGGCCCACCATGTTCTTGGGCTATTTTAAGTGTTTGGAATTCTAAGGAAGTTTTCAGGCTAGAGGTACGTGGCGCATCGCGCATGAGACGCGCATTTTGTAAAACAACGCGGGTTTTGGATCGGGCTTTGCCGTGGTTGAAATTACCATCGGTTCCGGATTTGTTTAGGCCTTTTGGGTTTCATTTTTTATATGGGATTGGTGGTGAAGGCCCAAAGAAAGTTAAGATGGTTAAGGCTCTTTGTGGGTTTGCTCATAATTTAGCTATGGAATTTGGGTGTGGGGTTGTGGCTACTGAGGTTGCTTCATGTGAACCATTGAGGTTTGGGATACCTTATTGGAAAATACTATCTTGTGCGGAGGATTTGTGGTGTATTAAGAGGCTAGTTGAAGATTATAGCGATGGTTCTGTTGGTGATTGGACCAAGTCTAGGTCCGAAATTTCCATTTTTGTGGACCCTAGAGAGATTTGA 1203 0.4106 MSDESVLKVVIREFEVNKDRERVEEVERTCEVGPSNKLSLFTDMLGDPICRLRHSPSYLMLIAEIDKEIVGMIRGCIKTVTCGKKFSRKSTKQHPVYSKLAYILGLRVTPNQRRMGIGLKLVKKMEAWFKDNGAEYSYMATETGNLASVKLFTEKCGYSKFRTPSILVNPVFAHKTKISPNVTIIPLTPSDAVILYRNRFATTEFFPHDIDAVLNNKLSLGTFLAVPRGSYNIETWPGPDRFLLGPPCSWAILSVWNSKEVFRLEVRGASRMRRAFCKTTRVLDRALPWLKLPSVPDLFRPFGFHFLYGIGGEGPKKVKMVKALCGFAHNLAMEFGCGVVATEVASCEPLRFGIPYWKILSCAEDLWCIKRLVEDYSDGSVGDWTKSRSEISIFVDPREI 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00741 400 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 178 IPR000182 GO:0016747
Trre10g00741 400 FunFam Probable N-acetyltransferase HLS1-like 18 165 - -
Trre10g00741 400 CDD NAT_SF 60 136 - -
Trre10g00741 400 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 400 - -
Trre10g00741 400 Pfam Acetyltransferase (GNAT) family 51 158 IPR000182 GO:0016747
Trre10g00741 400 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 19 161 IPR016181 -
Trre10g00741 400 Gene3D - 6 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00741 Trre-Chr10 5545241 5547153 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre10g00741 Acetyltransf_1 1.2e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00741 - - gmx:100800613 627.861