Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00734 ATGGGTAGTTTTGTTGACACCCCTTTTTCTTTGTCTAGTCTTCTCTGTCATGAACAAGATGAAACCACCTTCATCTTCCAAGAAGATGATGAAAATGACACTAACCCATGTTTTCTTTTGGATGATGAAGAAGAATACATTGATTATTTGTTCAAACAAGAAACAAGATTTGGATCCTTATCCTATGATGATTATGATGATGATGTTGATTCAAGTAAAAGCTTATTCTGGTTTAGAAATGCTCGTTTACATGCTATTGATTGGATTTTCAATACACAAGCAAAATTTGGATTCACATATCAAACAGCTTATTTATCAATCACTTATTTTGATCGGTTTCTTTCAAAACGATCCATTGATGAATCTAAACCATGGGCTATACAATTATTATCAGTGGCATGTTTATCAATTGCAGCAAAAATGGAAGAACAAATGGTTCCTCCATTATCAGAATATCCAATAGAGTATAGATTTGAGAACAAAGTTATAAAAAATATGGAACTTTTGATTTTAAGCACTTTGGAATGGAAAATGGGATTACCAACCCCTTTTGGTTATTTGCATTATTTCTTCACCAAATTCTGCAATGGCTCAAGATTAGATACAATAATCTCAAAAGCCACACAACACATTGTGACATTGGTCAAAGATTTTAATTTGATGAATCAAAGACCATCTATAATTGCTTCTGCTTCTATATTAGCAGCTTATGATTCCACATTAACCAAACAAGAAATGGATCTTCGGTTAAGTGTAATCTCATCATGGGGAAATCTAGAAAGTGGACATGTATTTTCTTGTTACAATGTTATACAAGAAAATAGGACAAACAAAGTTAAGAAGACACCTTCATCAGATTTATTAGTATCAATAGAGTCAAATTCCACATGTGTTGTTGTTGAGAACAAATCTAATGGTTGTTTAGGAGTTAAGAGAAAGCTTGGTTATGAAAACATTGAAGAATGTCAAGAACAAAAGCTACAAAGACCTTAG 993 0.3223 MGSFVDTPFSLSSLLCHEQDETTFIFQEDDENDTNPCFLLDDEEEYIDYLFKQETRFGSLSYDDYDDDVDSSKSLFWFRNARLHAIDWIFNTQAKFGFTYQTAYLSITYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQMVPPLSEYPIEYRFENKVIKNMELLILSTLEWKMGLPTPFGYLHYFFTKFCNGSRLDTIISKATQHIVTLVKDFNLMNQRPSIIASASILAAYDSTLTKQEMDLRLSVISSWGNLESGHVFSCYNVIQENRTNKVKKTPSSDLLVSIESNSTCVVVENKSNGCLGVKRKLGYENIEECQEQKLQRP 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00734 330 ProSitePatterns Cyclins signature. 82 113 IPR006671 -
Trre10g00734 330 Pfam Cyclin, C-terminal domain 181 280 IPR004367 -
Trre10g00734 330 Gene3D - 80 179 - -
Trre10g00734 330 PANTHER CYCLINS 43 278 IPR039361 -
Trre10g00734 330 SUPERFAMILY Cyclin-like 35 178 IPR036915 -
Trre10g00734 330 FunFam Cyclin-D5-1 77 179 - -
Trre10g00734 330 Pfam Cyclin, N-terminal domain 66 178 IPR006671 -
Trre10g00734 330 SMART cyclin_7 87 172 IPR013763 -
Trre10g00734 330 CDD CYCLIN_AtCycD-like_rpt1 81 176 - -
Trre10g00734 330 CDD CYCLIN_AtCycD-like_rpt2 182 271 - -
Trre10g00734 330 Gene3D - 180 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00734 Trre-Chr10 5445979 5447383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00734 10 261 Core Cell Cycle Gene Families AT4G37630 38.007 1.24e-47 159