Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00720 ATGTCTCCTTCCATTTCTCGTCTCTTCACTTCCCTTCCAAACCCTTCCTACTTCTCCACTTCACCCTCTTCTTCTTCTCACCAATATTCACAATTCCACTCACAACTCAAACTCCAATTCAAACCTTCTTCCACAAAATCGTTCACCACCCATTTCCAGAACAGAAAGAATGAACCACTTACGAAACTCAATGCATTGAACGAAGGAGTACAAGGAAGCATTGAAGAAGGAGACGAACAATTCATTCGTTCGTTTCGTGAAGCTTGGCCTTACCTTTGGGCTTATCGTGGAAGCACTTTTGTTGTCATCATTTCTGGTGAAATTGTCGCTAGTCACTTGGATCCCATTCTCAAGGATATAGCTTTTCTTCATCACCTTGGAATTCGGTTTGTTCTTGTTCCTGGTACTCATGTGCAAATTGACAAGCTTTTGAAAGATAGAGGGAGTGAGCCTAAGTATGTTGGGAGATATAGAATAACTGATGATGAATCTTTAGAAGCTGCAATGGAAGCGGCAGGAGGAATAAGAATAATGATGGAAGCTAAACTTTCACCTGGACCTTCCATATGCAATATTCGTAGACATGGTGATAATAGTCGGTGGCATGAAGTTGGTGTTAGTGTTGCAAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCGGTGGAATTGATTATGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTAACTCGCATGCGTGAGAGACTTGATGGGGGTTGTATAGTTATTTTAACAAACTTGGGCTACTCCAGCTCCGGAGAAGTATTGAATTGCAACACTTATGAAGTTGCCACAGCTTGTGCCTTGGCTATTGGGGCAGACAAGTTAATATGCATTATAGATGGTCCAATACTGGATGAGAATGGACGCCTAATTCGCTTCTTGCCTCTTGAAGAAGCAGACATGTTAATTCGTAAACGGGCTGAGCAAAGTGAAACGGCTGCTAACTATGTGAAAGCTGTTGACGAAGAAGGTTTCAATCTTGTTGAGCATAATAATATTAACGGGACAGTCAAATCTCCACCTAATGGAAAACGCATTACAGAATGGCATAATGCAACTTTCCACAATGGTGTTGGTTTTGAGAACGGAGATGGCTTAGGGAATTGCGAGCAAGGCTTTGCTATTGGAGGTCAAGAACGGCTAAGCCGAATGAATGGTTACCTGTCAGAATTGGCTGCTGCAGCCTTCGTTTGCAGAGGCGGAGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTTTATTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTTGCTAGTGACCTTTATGAAGGCACTCGAGAGGCAGAGGAAAAAGATCTTTCTGGAATAAAACAAATTATTGAGCCTTTGGAGGCATTTGGCATACTGGTTAAGCGGACTGATGAAGAGCTGCTACAAGCTTTGAAGAATTTCATTGTTGTGGAAAGAGAAGGTCAAATAATTGCCTGTGGTGCCCTTTTTCCTTACTTTGAGGAGAAGTCCGGAGAGGTTGCTGCTATTGCAGTATCTCCTGAGTGTCGCGGTCAAGGACAGGGAGACAAATTGCTTGATTATATGGAGAAGAAAGCAGCATCGCTTGGATTGAATAAGCTTTTCCTACTTACAACACGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATAATATTCCTGAAAAGAAAAAGAAAACAATCAACCTATCCCGAAATTCTAAGTATTATATGAAGAAGCTTCTACCAAATAAGAGTGGAATTACTGTTGGTGGAAATAAATTTGCTTAA 1824 0.4167 MSPSISRLFTSLPNPSYFSTSPSSSSHQYSQFHSQLKLQFKPSSTKSFTTHFQNRKNEPLTKLNALNEGVQGSIEEGDEQFIRSFREAWPYLWAYRGSTFVVIISGEIVASHLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLKDRGSEPKYVGRYRITDDESLEAAMEAAGGIRIMMEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVGGIDYGSTGEVKKVDVTRMRERLDGGCIVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDENGRLIRFLPLEEADMLIRKRAEQSETAANYVKAVDEEGFNLVEHNNINGTVKSPPNGKRITEWHNATFHNGVGFENGDGLGNCEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTREAEEKDLSGIKQIIEPLEAFGILVKRTDEELLQALKNFIVVEREGQIIACGALFPYFEEKSGEVAAIAVSPECRGQGQGDKLLDYMEKKAASLGLNKLFLLTTRTADWFVRRGFSECSIDNIPEKKKKTINLSRNSKYYMKKLLPNKSGITVGGNKFA 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00720 607 SUPERFAMILY Carbamate kinase-like 394 442 IPR036393 -
Trre10g00720 607 Pfam Acetyltransferase (GNAT) family 486 551 IPR000182 GO:0016747
Trre10g00720 607 Gene3D - 79 445 IPR036393 -
Trre10g00720 607 CDD NAT_SF 487 549 - -
Trre10g00720 607 Hamap Amino-acid acetyltransferase [argA]. 80 592 IPR010167 GO:0004042|GO:0005737|GO:0006526
Trre10g00720 607 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 449 569 IPR016181 -
Trre10g00720 607 Pfam Amino acid kinase family 100 348 IPR001048 -
Trre10g00720 607 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 446 594 IPR000182 GO:0016747
Trre10g00720 607 CDD AAK_NAGS-ABP 80 440 IPR033719 -
Trre10g00720 607 PANTHER AMINO-ACID ACETYLTRANSFERASE 24 600 IPR010167 GO:0004042|GO:0005737|GO:0006526
Trre10g00720 607 Gene3D - 446 592 - -
Trre10g00720 607 SUPERFAMILY Carbamate kinase-like 80 315 IPR036393 -
Trre10g00720 607 NCBIfam amino-acid N-acetyltransferase 400 592 IPR010167 GO:0004042|GO:0005737|GO:0006526
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00720 Trre-Chr10 5315554 5320506 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre10g00720 AA_kinase 1.1e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00720 K14682 - gmx:100777694 907.516