Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00719 ATGGCTTGTACTTGGAAGCCACTATTGACTTTACCAAACCAAAGAGAAACTCAACAAACTCTATTGTTTACACGTGACCCCATTTCTTGCCAACATCTCATCAATTTTGGTTCAACACTAAGAATTGAAAAGCTCAATTCTAAGAGGGTGTTTTGTCGTTTTGCTGCTGCTGCTGTAGTAAAAAAGAGCAAGTTTATTGTAAGAGGGTGTGGTTGTGAACAAAGTAGTGAGGAGGAATATGAATATTATGGTGTCACTGAGGAAGACAAAGATTTTGTTAAGGTTCTTCGTGAATCAAATCCTTATTTTCTTGTCCATAGAGACAGAGTTTTTGTTGTTCTCATTTCTGCTGAGATTATTGCTACTCCTAATTACTTCCATGCCATTCTTGAGGATATAGCTTTTCTTCATCACCTTGGAATTCGGTTTGTTCTTGTTCCTGGTACTCATGTGCAAATTGACAAGCTTTTGAAAGATAGAGGGAGTGAGCCTAAGTATGTTGGGAGATATAGAATAACTGATGATGAATCTTTAGAAGCTGCAATGGAAGCGGCAGGAGGAATAAGAATAATGATGGAAGCTAAACTTTCACCTGGACCTTCCATATGCAATATTCGTAGACATGGTGATAATAGTCGGTGGCATGAAGTTGGTGTTAGTGTTGCAAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCGGTGGAATTGATTATGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTAACTCGCATGCGTGAGAGACTTGATGGGGGTTGTATAGTTATTTTAACAAACTTGGGCTACTCCAGCTCCGGAGAAGTATTGAATTGCAACACTTATGAAGTTGCCACAGCTTGTGCCTTGGCTATTGGGGCAGACAAGTTAATATGCATTATAGATGGTCCAATACTGGATGAGAATGGACGCCTAATTCGCTTCTTGCCTCTTGAAGAAGCAGACATGTTAATTCGTAAACGGGCTGAGCAAAGTGAAACGGCTGCTAACTATGTGAAAGCTGTTGACGAAGAAGGTTTCAATCTTGTTGAGCATAATAATATTAACGGGACAGTCAAATCTCCACCTAATGGAAAACGCATTACAGAATGGCATAATGCAACTTTCCACAATGGTGTTGGTTTTGAGAACGGAGATGGCTTAGGGAATTGCGAGCAAGGCTTTGCTATTGGAGGTCAAGAACGGCTAAGCCGAATGAATGGTTACCTGTCAGAATTGGCTGCTGCAGCCTTCGTTTGCAGAGGCGGAGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTTTATTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTTGCTAGTGACCTTTATGAAGGCACTCGAGAGGCAGAGGAAAAAGATCTTTCTGGAATAAAACAAATTATTGAGCCTTTGGAGGCATTTGGCATACTGGTTAAGCGGACTGATGAAGAGCTGCTACAAGCTTTGAAGAATTTCATTGTTGTGGAAAGAGAAGGTCAAATAATTGCCTGTGGTGCCCTTTTTCCTTACTTTGAGGAGAAGTCCGGAGAGGTTGCTGCTATTGCAGTATCTCCTGAGTGTCGCGGTCAAGGACAGGGAGACAAATTGCTTGATTATATGGAGAAGAAAGCAGCATCGCTTGGATTGAATAAGCTTTTCCTACTTACAACACGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATAATATTCCTGAAAAGAAAAAGAAAACAATCAACCTATCCCGAAATTCTAAGTATTATATGAAGAAGCTTCTACCAAATAAGAGTGGAATTACTGTTGGTGGAAATAAATTTGCTTAA 1863 0.4053 MACTWKPLLTLPNQRETQQTLLFTRDPISCQHLINFGSTLRIEKLNSKRVFCRFAAAAVVKKSKFIVRGCGCEQSSEEEYEYYGVTEEDKDFVKVLRESNPYFLVHRDRVFVVLISAEIIATPNYFHAILEDIAFLHHLGIRFVLVPGTHVQIDKLLKDRGSEPKYVGRYRITDDESLEAAMEAAGGIRIMMEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVGGIDYGSTGEVKKVDVTRMRERLDGGCIVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDENGRLIRFLPLEEADMLIRKRAEQSETAANYVKAVDEEGFNLVEHNNINGTVKSPPNGKRITEWHNATFHNGVGFENGDGLGNCEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTREAEEKDLSGIKQIIEPLEAFGILVKRTDEELLQALKNFIVVEREGQIIACGALFPYFEEKSGEVAAIAVSPECRGQGQGDKLLDYMEKKAASLGLNKLFLLTTRTADWFVRRGFSECSIDNIPEKKKKTINLSRNSKYYMKKLLPNKSGITVGGNKFA 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00719 620 CDD NAT_SF 500 562 - -
Trre10g00719 620 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 462 582 IPR016181 -
Trre10g00719 620 Pfam Acetyltransferase (GNAT) family 499 564 IPR000182 GO:0016747
Trre10g00719 620 Pfam Amino acid kinase family 116 361 IPR001048 -
Trre10g00719 620 SUPERFAMILY Carbamate kinase-like 407 455 IPR036393 -
Trre10g00719 620 Gene3D - 90 458 IPR036393 -
Trre10g00719 620 Hamap Amino-acid acetyltransferase [argA]. 91 605 IPR010167 GO:0004042|GO:0005737|GO:0006526
Trre10g00719 620 NCBIfam amino-acid N-acetyltransferase 413 605 IPR010167 GO:0004042|GO:0005737|GO:0006526
Trre10g00719 620 CDD AAK_NAGS-ABP 91 453 IPR033719 -
Trre10g00719 620 PANTHER AMINO-ACID ACETYLTRANSFERASE 76 613 IPR010167 GO:0004042|GO:0005737|GO:0006526
Trre10g00719 620 Gene3D - 459 605 - -
Trre10g00719 620 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 459 607 IPR000182 GO:0016747
Trre10g00719 620 SUPERFAMILY Carbamate kinase-like 89 328 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00719 Trre-Chr10 5314403 5320506 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre10g00719 AA_kinase 3.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00719 K14682 - gmx:100777694 922.154