Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00656 ATGGTGTTACTAGATTCACAATGGTTCATCTTAGTAGCAGCTATGTTAGGTGGATATGCATTTGTATTTGGTTTCATTAGGAGATTGAATGAATGGTACTATGTTAGCAGGTTGGGAAAATTACCTCTCCCACCAGGTGATATGGGTTGGCCTTTCCTTGGTAACATGCCTACCTTCCTCAAAGCTTTCAAATCTGATCCTGATTCCTTCATCAATAACCTTATTTCAAGATATGGCAGGACAGGTATGTACAGGACACATTTGTTTGGAAATCCAAGCATCATAGTATGTACACCAGAGACATGTCGAAAGGTTCTAACAGATGAAGAGAATCTTAAACTTGGTTACCCTTCTTCAACAACAGCCCTTACAGGGAAAAGATCATTCCATGGAATCTCAAATCATGAGCATCGGCGATTGCGGCGATTAATAACATCTCCTATAAATGGTCATGAAGCATTGTCAAGTTATATTGGTCTTACTGAAGATATTGCTGTGAAACATTTAGAAGAGTTGTCTACAATGAATAAGCCAATTGAGTTTCTTAAAGAGATGAGAAAGTTTGCTTTTGAAGTCATTACTAGAATTTTTATTTCATCTGATTGTGATCATGTTGATCTTGGTTTGGTTGAGAATTTGTATATTGATTTGAACAAGGGAATGAAGTCACTTTCCATCAATCTTCCTGGATTTGCATTCCATAAAGCACTCAAGGCACGAAAGAAATTGGTGAAAATGTTGCAAGGCGTAGTGGACCAAAAGAGGAAAAATAATAATAATGATAATAATAGAGAGAAAAAAGATATGATGGATTTATTGATGGAAGTCAAAGATGAAGAAGGTAATATGTTGGAGGATGAAGATATTATAGATTTACTTCTTGTGTTCTTGTTAGCTGGTCATGAAAGCTCTGCTCATGGAATTTTGTGGACTATTATCTATCTCTTGGATCATCCACATGTCCTACAAAAAGCCAAGAAAGAACAAGAAGAGATCGTGGAAATAAGGCCTTCCACTCAAAAAGGACTGAACTTTAAGGAAATTAAGCAAATGGAGTATTTATCAAAGGTTATTGATGAGATGCTGCGTAGAACAACTATATCGTTTGCAAACTTTAGATTGGCAAAAGTTGATGTTAACATCAATGGTTATACTATACCGAGAGGATGGAAAGTACTAGTTTGGAATAGAGGTGTTCACATGGATCCTGAAACTTACTCTAACCCAAAGGAATTTGATCCTTCAAGATGGGAGAATTACAAAGCAAGAGCAGGATCATTCCTTCCTTTTGGATTAGGAAGCAAATTTTGTCCTGGAAGTGATTTAGCTAAACTTGAGATAACTATTTTCCTCCATCATTTTCTTCTTAATTACAGGATGGAGAGACTTAATCCAGATTCTCCAATTACCTACTTGCCAGTGCCAAGACCTACAGACAATTGCCTTGCAAGGATTATAAAAGTAACATAA 1470 0.3633 MVLLDSQWFILVAAMLGGYAFVFGFIRRLNEWYYVSRLGKLPLPPGDMGWPFLGNMPTFLKAFKSDPDSFINNLISRYGRTGMYRTHLFGNPSIIVCTPETCRKVLTDEENLKLGYPSSTTALTGKRSFHGISNHEHRRLRRLITSPINGHEALSSYIGLTEDIAVKHLEELSTMNKPIEFLKEMRKFAFEVITRIFISSDCDHVDLGLVENLYIDLNKGMKSLSINLPGFAFHKALKARKKLVKMLQGVVDQKRKNNNNDNNREKKDMMDLLMEVKDEEGNMLEDEDIIDLLLVFLLAGHESSAHGILWTIIYLLDHPHVLQKAKKEQEEIVEIRPSTQKGLNFKEIKQMEYLSKVIDEMLRRTTISFANFRLAKVDVNINGYTIPRGWKVLVWNRGVHMDPETYSNPKEFDPSRWENYKARAGSFLPFGLGSKFCPGSDLAKLEITIFLHHFLLNYRMERLNPDSPITYLPVPRPTDNCLARIIKVT 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00656 489 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00656 489 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00656 489 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00656 489 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00656 489 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00656 489 PANTHER CYTOCHROME P450 26 40 473 - -
Trre10g00656 489 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00656 489 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00656 489 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00656 489 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00656 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Trre10g00656 489 SUPERFAMILY Cytochrome P450 34 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00656 489 Gene3D Cytochrome P450 35 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00656 489 Pfam Cytochrome P450 44 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00656 Trre-Chr10 4688136 4691789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00656 8 488 Cytochrome P450 AT2G32440 55.579 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00656 K04123 - qsu:112005461 687.567