Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00652 ATGGTGAAAAATAAGAGAACAACATGGATTCCAAAAGCAACATTGGTATCTGTCTCCCAACATAAGATCGATCAGCATAGAAAAGAAGGTCTAGATATTGAAGACTTGGTGGTTCTATCAGGTAGCCATACTATAGGAAGGGCAAGATGTGTAAGTTTCAAGCAGAGGATCTATGACACAAAACAGGAATATTACCATGGCTATGAATATGATCACTACAAACGATACACAAACTTCAGAAGAATCCTACGGTTTGATAACCATTACTTCATAAACTTTCTTGAAGGAAAAGGCTTGTTAGGTTCTGATAATGTTTTGATCGGCGAAGACTTGCATGGAATTATTAGGGAGCAGGTTTGGGGTTATGCCTCTAATGAAAAACTTTTCTTTGATTCATTTGCTAAGTCTATGATTAAGATGGGAAATATTAATGTTCTTACAGGAGATGAAGGAGAAATAAGAAGGAATTGTAGGTTTGTTAACCCTTAG 489 0.362 MVKNKRTTWIPKATLVSVSQHKIDQHRKEGLDIEDLVVLSGSHTIGRARCVSFKQRIYDTKQEYYHGYEYDHYKRYTNFRRILRFDNHYFINFLEGKGLLGSDNVLIGEDLHGIIREQVWGYASNEKLFFDSFAKSMIKMGNINVLTGDEGEIRRNCRFVNP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00652 162 PANTHER PEROXIDASE 72-RELATED 20 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00652 162 PRINTS Plant peroxidase signature 92 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00652 162 PRINTS Plant peroxidase signature 135 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00652 162 PRINTS Plant peroxidase signature 76 91 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00652 162 PRINTS Plant peroxidase signature 34 46 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00652 162 PRINTS Haem peroxidase superfamily signature 35 50 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00652 162 PRINTS Haem peroxidase superfamily signature 78 93 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00652 162 ProSiteProfiles Plant heme peroxidase family profile. 28 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00652 162 Gene3D - 141 161 - -
Trre10g00652 162 Pfam Peroxidase 15 110 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00652 162 ProSitePatterns Peroxidases proximal heme-ligand signature. 35 45 IPR019793 -
Trre10g00652 162 Gene3D Peroxidase, domain 2 83 140 - -
Trre10g00652 162 Gene3D Peroxidase, domain 2 16 73 - -
Trre10g00652 162 SUPERFAMILY Heme-dependent peroxidases 21 162 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00652 Trre-Chr10 4651050 4652089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00652 11 161 Peroxidase AT2G35380 50.867 1.23e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00652 K00430 - gmx:100778051 224.942