Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00651 ATGGAACCACCTATGAGACTATTACTGATCTTAATTACTATTTTGTCCAATGTTCATACTCCAAGGAGTAGTAAACTTCTTGTTCATGAGTACTATAAGGAAAAATGTCCCTTAGCTGAGGAGATTGTGAGACATAACATGGCGGTAGCAGTTTCGAAAGATCCGCGTTTAGCAGCATCATTACTTCGATTACATTTCCATGATTGTTTTGTTATGGGGTGCGATGCATCAGTACTTTTAGACAGTGTTGAAGGCATGACAAGTGAGAAGCTAGCAGGGCCGAATGTGAATTCTTTGCGTGGATTTGAAGTCATTGATAAGATAAAGTATTTACTTGAAGAGGAATGTCCTCTCACTGTTTCATGTGCTGATATTCTTGCTATGGCTGCTCGTGATGCTGTTGAATTGAGAGGAGGACCAAGATGGGAAGTCTGGCTGGGGAGGAAGGATTCCCTTGAATCAAGTTTCAGTGGAGCCAACCTATTCATCCCTGCTCCAAATTCTTCTTTAGAGGTTTTAATTAATAATTTTAAGCAACAGGGTCTAGATATTGAAGACTTGGTGGTTCTATCAGGTAGCCATACTATAGGAAGGGCAAGATGTTTAAGTTTCAAGCAGAGGATCTACGAAACAAAACAGGAATATCACCATGGCTACGAATATGATCGCTACAAACGATACACAAACTTCAGAAGAATCCTACGGTCCATATGTCCTGTTACGGGAAGGGACGACAAATTTGCACCCCTTGATTTTCAAACACCAAAAAGGTTTGATAACCATTACTTCGTAAACATTCTTGAAGGAAAAGGATTGTTAGGTTCTGATAATGTTTTGATCGGCGAAGACTTGCATGGAATTATTAGGGAGCAGGTTTGGGGTTATGCCTCCAATGAAAAACTTTTCTTTGATTCATTTGCTAAGTCTATGATTAAGATGGGAAATATTAATGTTCTTACAGGAGATGAAGGAGAAATAAGAAGGAATTGTAGGTTTGTTAACCCTTAG 1008 0.3919 MEPPMRLLLILITILSNVHTPRSSKLLVHEYYKEKCPLAEEIVRHNMAVAVSKDPRLAASLLRLHFHDCFVMGCDASVLLDSVEGMTSEKLAGPNVNSLRGFEVIDKIKYLLEEECPLTVSCADILAMAARDAVELRGGPRWEVWLGRKDSLESSFSGANLFIPAPNSSLEVLINNFKQQGLDIEDLVVLSGSHTIGRARCLSFKQRIYETKQEYHHGYEYDRYKRYTNFRRILRSICPVTGRDDKFAPLDFQTPKRFDNHYFVNILEGKGLLGSDNVLIGEDLHGIIREQVWGYASNEKLFFDSFAKSMIKMGNINVLTGDEGEIRRNCRFVNP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00651 335 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 FunFam Peroxidase 30 171 - -
Trre10g00651 335 FunFam Peroxidase 164 313 - -
Trre10g00651 335 CDD secretory_peroxidase 27 333 IPR033905 GO:0004601|GO:0042744
Trre10g00651 335 Gene3D - 31 334 - -
Trre10g00651 335 SUPERFAMILY Heme-dependent peroxidases 28 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 Gene3D Peroxidase, domain 2 164 314 - -
Trre10g00651 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Trre10g00651 335 ProSiteProfiles Plant heme peroxidase family profile. 26 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Trre10g00651 335 PANTHER PEROXIDASE 72-RELATED 26 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre10g00651 335 Pfam Peroxidase 44 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00651 Trre-Chr10 4647556 4649113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00651 86 334 Peroxidase AT2G35380 66.667 9.20e-121 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00651 K00430 - gmx:100778051 572.392