Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00592 ATGGCTTCTTCCTCTACCCTTTACATAATTTCCATTCCTTTTCTTCAACTTGTGTTAGTCTTTGGAAATGTTACTCGAAGTTCTACACTCACTACCACCAATAACAACAACAATCCATGGCTATCACCTTCTGGTGAATTTGCTTTTGGATTCCAACAACTTAAAACTACAACAAACCTCTTCATGCTTGCAATATGGTACAATAAAATACCTGAAAAAACAATTGTTTGGAGTGCAAAAGACATAAACAACAACAACCTCGTACAAGCACCGACAGGATCACAGATTCAGTTAACATCAGGTGGACTGACGTTGACAACATCACAAGGTGAATCTATTTGGACAGCACAACCAAATGAACCTGTTTCCTATGGAAACATGCTTGACAATGGAAACTTTGTTCTTGTAAACAAGAATTCTACTATTGTTTGGGAAAGTTTCAAGTTTCCTACTGATACCCTTTTGCCTACTCAATTTCTTGAGTTGAAAGCAACCTTAACTTCAAGATTATCAGAGACTAATTACACAAGTGGAAGGTTTCAACTTTATTTTAATGATGGTGATGATAATAATCATGTTTTGTTAAGTCCACTTGCATGGCCTACTCAATTACGTTACAAATTTTACTATAGAATTGATGCTCCTAATAACTCTGCTTCTTCAAGTTTAGTTTTTGATGAATCAGGAGAAATTTATGTTGAAACAAATAAAAATGGTACTAGAGTGAAACCTGAGGGTACACAATGGAAGAATTTAGTTCTTGATCCTAAGTTGTATTATTATAGAGCAACACTAGATTATCATGGAGTTTTCACACAATATTCTCATCCAAGAGATACTAAAGCACAACAAGAATGGACTATTATGAGGTATGTTCCTGATAACATTTGCATTGCTATATTCAATGAAAAGGGTAGTGGAACTTGTGGATATAATAGCTATTGTTCCATGGAAAATCAAAGACCTACTTGTAAATGTCCTTATGGTTATTCACTGATAGATTCAAGTAATCAATTTGGGGGGTGTAAACTCAATTTCACATTTGCTTGTGGAGCTGATAATGGTGAAGGATTGAATGTGAAGCAAGAAGATTTATATGAGTTCACTGTTCTTAAAGATGTGGATTGGCCTTTATCAGATTATGAAGAGATGCAGCCTTATGGTCAACAGGATTGTCAACAATCTTGTTTGCATGATTGCATGTGTGCTGTTGCAGTTTTCAATAACAAAACTTGTTGGAAGAAAAGATTGCCTCTTGCTAATGGAAGAGCGCAAAGTGGTGGTCAATTAGTACTTGTGAAAACAAGGGTTTCTCCTCTTGGTAGCCTTGGTAGTAGTCCTTCAAATTCACCTGATTCGAATAAAGACGACGGAGTTAAGCCGATTCTTCGTGGTTTGCTCATTGGTTCAACTGTTTTCAATAGCATACTTTTGGCTTTGGTTGTTTTCGTGACTTTGTGGAAGCCGAAAAGGGTTGTCCAAGCTGCAACTCTAGTGGAAACAAATTTATGTTCGTTTAGTTATGAGGCGTTAAAAGAAGCTACACGGGGTTTTAGTGAAGAACTAGGTAGGGGTTCGTTTGGAATTGTTTATAAAGGTGAATTAAAAGCAGCAGCATCTTGTAATGCTGTTGCTGTTAAGAGATTGGATCGGTTAGCACAAGACCGTGAGAAGGAATTTAAAACCGAGTTGAGAGCTATTGGTAAAACCTGCCACAAAAACTTGGTAAGATTGATTGGATATTGTGATGAAGGACTGCATAGAATGTTGGTGTATGAGTTCATGAGCAATGGTAGTCTAGCAGATATCTTGTTTGGACAAACCAAACCGATTTGGAATCAAAGGATTGGATTTGCACTGGGGATTGCAAGAGGATTGGTGTATTTACATGAAGAGTGTGATGCTCCCATCATTCATTGTGACATAAAGCCTCAAAATATACTCATAGACGAGTACTTCACGGCAAAGATATCTGACTTTGGATTGGCCAAGTTGTTGTTGGCTGATCAAAGTAGAACAAATACAATGATCCGAGGAACACGAGGATATGTAGCTCCTGAATGGTTCAAAAATGTTCCTGTGACGGCTAAAGTGGATGTTTACAGCTTCGGTTCCATGTTGTTAGAAATCATTTGCTGCAGAAAAAGTGTGGTGCTGATGGAGTCAGGGGAGGAAGAGAAGGCAATTTTGACAGATTGGGTCTGTGATTGCTACATGGAAGGGAGAATAGATGTTCTTGTGGAGAATGATCAAGAGGCCTTGGAAGACATTGGCAGGTTAGAAAAGTGGATAAAGATAGCAATTTGGTGCATTCAAGAGCATCCTGAAATGAGGCCAACAATGAGGATGGTCATGCAAATGCTAGAAGGTGTGGTTCAAGTCCCAAACCCACCATCGCCTTTTTCCTTCAGTTCGATTGCTTGA 2424 0.3816 MASSSTLYIISIPFLQLVLVFGNVTRSSTLTTTNNNNNPWLSPSGEFAFGFQQLKTTTNLFMLAIWYNKIPEKTIVWSAKDINNNNLVQAPTGSQIQLTSGGLTLTTSQGESIWTAQPNEPVSYGNMLDNGNFVLVNKNSTIVWESFKFPTDTLLPTQFLELKATLTSRLSETNYTSGRFQLYFNDGDDNNHVLLSPLAWPTQLRYKFYYRIDAPNNSASSSLVFDESGEIYVETNKNGTRVKPEGTQWKNLVLDPKLYYYRATLDYHGVFTQYSHPRDTKAQQEWTIMRYVPDNICIAIFNEKGSGTCGYNSYCSMENQRPTCKCPYGYSLIDSSNQFGGCKLNFTFACGADNGEGLNVKQEDLYEFTVLKDVDWPLSDYEEMQPYGQQDCQQSCLHDCMCAVAVFNNKTCWKKRLPLANGRAQSGGQLVLVKTRVSPLGSLGSSPSNSPDSNKDDGVKPILRGLLIGSTVFNSILLALVVFVTLWKPKRVVQAATLVETNLCSFSYEALKEATRGFSEELGRGSFGIVYKGELKAAASCNAVAVKRLDRLAQDREKEFKTELRAIGKTCHKNLVRLIGYCDEGLHRMLVYEFMSNGSLADILFGQTKPIWNQRIGFALGIARGLVYLHEECDAPIIHCDIKPQNILIDEYFTAKISDFGLAKLLLADQSRTNTMIRGTRGYVAPEWFKNVPVTAKVDVYSFGSMLLEIICCRKSVVLMESGEEEKAILTDWVCDCYMEGRIDVLVENDQEALEDIGRLEKWIKIAIWCIQEHPEMRPTMRMVMQMLEGVVQVPNPPSPFSFSSIA 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00592 807 SUPERFAMILY Protein kinase-like (PK-like) 500 789 IPR011009 -
Trre10g00592 807 Pfam PAN-like domain 367 413 IPR003609 -
Trre10g00592 807 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Trre10g00592 807 SMART serkin_6 516 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g00592 807 Gene3D - 25 149 IPR036426 -
Trre10g00592 807 FunFam S-receptor-like serine/threonine-protein kinase 488 594 - -
Trre10g00592 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Trre10g00592 807 PIRSF SRK 1 807 IPR024171 GO:0004674
Trre10g00592 807 FunFam Serine/threonine-protein kinase 151 300 - -
Trre10g00592 807 ProSiteProfiles Protein kinase domain profile. 516 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g00592 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 595 796 - -
Trre10g00592 807 ProSitePatterns Protein kinases ATP-binding region signature. 522 547 IPR017441 GO:0005524
Trre10g00592 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 202 IPR036426 -
Trre10g00592 807 Gene3D Phosphorylase Kinase; domain 1 483 594 - -
Trre10g00592 807 Pfam D-mannose binding lectin 74 164 IPR001480 -
Trre10g00592 807 Gene3D Transferase(Phosphotransferase) domain 1 595 794 - -
Trre10g00592 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 20 148 - -
Trre10g00592 807 SMART blect_4 31 150 IPR001480 -
Trre10g00592 807 Pfam Protein kinase domain 519 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g00592 807 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 29 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00592 Trre-Chr10 4072967 4075390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00592 476 793 Receptor kinase-like Gene Family AT5G45780 40.729 5.72e-69 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre10g00592 Pkinase 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00592 - - lja:Lj2g3v1989170.1 1097.8