Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00556 ATGGGGTTGATGGAAGATGTGACATTAATTGGAGGGTTAATAGGAGTTCAATTTATATATGCAGGAAATGCTGAGTTAATGAGTTATTCAATGTCATTAGGAATAAGCCCTCTTACCATTGTCATTTTTACTTCCATTGCTACATTCCTTATTCTCTTCCCTGCTGCTTTTTTTTTTGAAAGGAATAAATGGCCTAATAATTGCAGTTTAAAGTTTATGATGCAGATAGGTTTTCTTTCATTTGGAGGATTAGCTTTTCAGTCTTTATTCCTCAAAGGAATTAGTCTAACTTCGGCGGCAATGGGAACAGCTATGCCAAATCTTGCCCCAGGTCTTATCTTCGTCATCGCATGGACTGCTGGGTTAGAGAAAGTAAACTTAAGCAACAAGTATAGTAAATTAAAAATCTTAGGAACATTATTATGTGTATTGGGAGCTTTCACAATGAGCATAATGCAAAGCATTTCTGCTCCTGCAACCGAAAAAGAGGCTCCACTTCCATCATCATCAACACCATCAGATACTCTCTTTGACGTGCAAAAGATCATCGGTTGTCTCTATCTAATGATTTCAGTTTTAATATTGTCAAGTAGTGTTGTCCTGCAGGCTTTTGCTCTCGGTGACTTTCCTGCACCGATGTCCTTGAGCGCAATGACGTCGTTGTTTGGAGGATTCATGACTGCAGTTGTTCAATTATTTCAAGGCGACGAACTTAAAGCTGGTTTGCAACTTGTGAGCTTTGGAGACTTGATTGGCTTTTCCGTTCTGACTGGTGGAGTGAGTGGAATATCCCTAAGCTTCAATGGATGGGCACTTAAGAAGAGAGGACCAGTCTTTGTCTCTATGTTTAGCCCTATTGGAACAGTATGCTCAGTTATTTTCTCTCTATTTACCCTTGGAAACACTATTAATATTGGAAGCATTGTTGGTATGTTCCTTATGTTCAGTGGACTTTACATAGTTCTTTGGGCCAAAGGAAAAGAAGGATATATAGATGGTGGAGATGTCATTGAGAAAGCTTGA 1023 0.39 MGLMEDVTLIGGLIGVQFIYAGNAELMSYSMSLGISPLTIVIFTSIATFLILFPAAFFFERNKWPNNCSLKFMMQIGFLSFGGLAFQSLFLKGISLTSAAMGTAMPNLAPGLIFVIAWTAGLEKVNLSNKYSKLKILGTLLCVLGAFTMSIMQSISAPATEKEAPLPSSSTPSDTLFDVQKIIGCLYLMISVLILSSSVVLQAFALGDFPAPMSLSAMTSLFGGFMTAVVQLFQGDELKAGLQLVSFGDLIGFSVLTGGVSGISLSFNGWALKKRGPVFVSMFSPIGTVCSVIFSLFTLGNTINIGSIVGMFLMFSGLYIVLWAKGKEGYIDGGDVIEKA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00556 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 326 - -
Trre10g00556 340 PANTHER WAT1-RELATED PROTEIN 13 328 IPR030184 GO:0016020|GO:0022857
Trre10g00556 340 Pfam EamA-like transporter family 15 150 IPR000620 GO:0016020
Trre10g00556 340 Pfam EamA-like transporter family 183 322 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00556 Trre-Chr10 3816976 3819363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00556 3 332 Nodulin-like Gene Family AT5G47470 57.831 4.90e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00556 - - aprc:113870214 480.715