Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00532 ATGGCTGGTGGTTGGGTGAAATCATTGCAATGCAAATCAAAAGCATTTGAAGATGTTTACAACCCAAATACTAAAAACAGATTACAAAGTGCAAGTTGTAGAAAAAGTGTTCAAAACATCAAAGATGTTGTTGTTGAAACAACAAAACCAAAATCCAAAAAACCGCTTCAAAAACATCATAGTTCAAGATATCCAACAACAACAACAGCTTCTAATACCAAAACCGATTTTGAAACTACCATGAACCGTTCTAGAAGTGCAAACTCAACCACCGCAAACCGCCACCTTCCGCCGCCGGACCCACGTTTTTCTTCTCTCACGGAGCTAACTGAAGGACATCCTTCAAGGAATGTAGTGGAGATAATCTTTCATACAAGCTGGGGACCGAAACCGTTTTCGGGTCGGGTTGAAATGATTTTCAAGGTTCATAATGGTTCAAGAACGGTTACCCGGTTTGAAGAGTATCGTGAAACGGTGAAAAACCGATCTGGTTCGGTTAACACGAACAATCATGAGGAGAATGCACGGTGTGTTGCGGATGGGAATGAAGTGATGAGGTTTCATTGTTTGGGTCCCACTTCCGGCGGTGGACCCTACGGTGGAGCATGTGTGGGGTCATTTCCAGGTGGTAAAGGTACGGCGATCTGCACATTTTCCGGTAGCGGCGGGGCTCATGAGAGTTCTGGTGGTGGTAGAGGAAGAAGGGCTATGTTGGTTTGTCGGGTCATAGCGGGTCGGGTTTCAAAGCAAGTAGGGTTTATGGACTCGTTGTTGGATGGACGAGTTGGGTTTGACTCGGTGAGTGGTGATAATGGCGAGTTGTTGGTTTTTGATTCGCGTGCTGTTTTGCCTTGTTTTCTTATCATTTATAAATTGTAA 879 0.4448 MAGGWVKSLQCKSKAFEDVYNPNTKNRLQSASCRKSVQNIKDVVVETTKPKSKKPLQKHHSSRYPTTTTASNTKTDFETTMNRSRSANSTTANRHLPPPDPRFSSLTELTEGHPSRNVVEIIFHTSWGPKPFSGRVEMIFKVHNGSRTVTRFEEYRETVKNRSGSVNTNNHEENARCVADGNEVMRFHCLGPTSGGGPYGGACVGSFPGGKGTAICTFSGSGGAHESSGGGRGRRAMLVCRVIAGRVSKQVGFMDSLLDGRVGFDSVSGDNGELLVFDSRAVLPCFLIIYKL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00532 292 MobiDBLite consensus disorder prediction 61 95 - -
Trre10g00532 292 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 290 - -
Trre10g00532 292 MobiDBLite consensus disorder prediction 46 108 - -
Trre10g00532 292 Gene3D - 104 291 - -
Trre10g00532 292 SUPERFAMILY ADP-ribosylation 105 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00532 Trre-Chr10 3649886 3650764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00532 105 291 C2H2 Transcription Factor Family AT5G54630 37.557 1.30e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00532 - - gmx:100804686 434.106