Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00531 ATGGAAAATTTGAGGGAGAATGAGATTGAGGACAATATGTCAACGTCACCTCCATCTGTTGGTTCCATGCAAATTGCAGGAAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAAGCATATCTTGTCAATAGATTTTCAGAGATTGATATACAAGTTCAGGATTCTAGTTTCAACCAAGATCCTCCTCTACCTGTATATCTCAAGTTTGAAGATGTAGAGTTCAAAGTGAGAAATAGTCAAACAGCTTCCAAAAACCCTCTGAAGAGAATGGTGTCAAAGGCATCCACAGAAAAAAATGTGGAAGAAAGAAACAAATACAAGAAAATCTTAAAGGGTATCACAGGAAGCATTGGGCCGGGCGAAATTCTAGCTTTGATGGGTCCTTCTGGTAGTGGAAAAACAACATTGTTGAGAGTTATAGGTGGAAGATTAACTGATAATGTTAAAGGAAATATAACTTACAATGATGTTCCATATAGCCCTGCTCTCAAGAGAAGGATTGGATTTGTACCGCAAGAGGATGTGCTTTTCCCACAACTTACAGTAGAAGAAACATTAATCTTCTCTGCATTCTTAAGACTACCAACCAATATGAGCAAGCAACAAAAATATGCAAGAGTTGAGAACACTGTCAAGGATCTAGGCCTAGAAAGATGCCGCCACACGAAAATAGCTGGAGGCATATCAGGAGGAGAAAGGAAGAGAACAAGCATTGGCAATGAAATTCTTGTTGATCCTTCACTGCTGTTACTTGACGAACCAACTTCAGGCCTTGATTCGACCTCAGCTAATAAACTCCTTCTCACTCTTCAGGGACTAGCCAAGGCCGGAAGAACTATAATCACAACAATTCACCAACCATCAAGCAGAATCTTTCACATGTTTAACAAACTTCTTCTGATATCAGAAGGGTCTCCTGTTTTTTATGGGAAGGCTAGAGACACAATGGAGTACTTTTCATCATTGAGTTTTGTCCCGGAAATACCGATGAATCCAGCAGAATTCTTGCTTGACTTAGCAACTGGACAAGTAAATGATATAAGTGTTCCACAAGATATTATGAAAGATCAAGAATCTACTGATCCTTCAGCAGCTGTTATTAAGTATGTACAACTTAAGTATAAAGACATACTTGAGCCAAAAGAAAAAGAGAATCATAAAAGAGCAAACACACCAAAACATCTTCAACTAGCTATTCAGGTTAAAAAGGAATGGACATTAAGTTGGTTAGACCAATTCGTTAATATTCTTTATAAGAGAACATTCAAAGCAAGATGTATGGAATATTTTGATATATTAAGACTTGTTCAAGCACTTGGAATTGCACTTTTGTTGGGACTACTTTGGTGGAAATCTACGATCAATACAGAAGTCCAACTCCGAGATCAGGTTGGTTTAATGTTCTATATTTGTATATTTTGGACATCTACATGTATTTTTGGAGCAGTGTATGTATTTCCATTTGAAAAAGTGTACTTAAGAAAAGAAAGGAAAGCAGATATGTATAGATTAAGTGTATACTATGCAAGTAGTACTCTATGTGACATGATGGCACATGTTATGTATCCTACTATTTTCATGCTCATTGTGTACTTCATGGTTGGTTTTAAGAGCACAGTGGCTTGCTTCTTCCTTACGTTATTCTCGGTTTTGCTAATAGCTATAACAAGTCAAGGTGCAGGAGAACTATTTGGAGCTGCAGTTATGAGTATTGAAAGAGCAGGAATGGTTGCTTCTTTGATACTTATGTTATTTCTTCTTACAGGTGGATACTATGTCCAGCATATACCAAAGTTCATGCAATGGTTAAAGTATATGTCATTTATGTACTATGGATTTAGGCTTCTACTAAAAGTGCAATATTCAGGAGAGCAACTATATGAATGTGAAAGTTATGGAGGTTGTAGGCCCCTTCAAAGTTCACCTTCATTTGATACTGTAAACTTGAAAGGTGGTTTGAGTGAAGTTTGGGTTCTGCTAGCCATGGCTCTTTGCTTTAGAATAATGGCTTACTTTTGTCTCCGTAGAAGAATTGATGTATGA 2049 0.3734 MENLRENEIEDNMSTSPPSVGSMQIAGSNGFGHSMEFMSQAYLVNRFSEIDIQVQDSSFNQDPPLPVYLKFEDVEFKVRNSQTASKNPLKRMVSKASTEKNVEERNKYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLTDNVKGNITYNDVPYSPALKRRIGFVPQEDVLFPQLTVEETLIFSAFLRLPTNMSKQQKYARVENTVKDLGLERCRHTKIAGGISGGERKRTSIGNEILVDPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFNKLLLISEGSPVFYGKARDTMEYFSSLSFVPEIPMNPAEFLLDLATGQVNDISVPQDIMKDQESTDPSAAVIKYVQLKYKDILEPKEKENHKRANTPKHLQLAIQVKKEWTLSWLDQFVNILYKRTFKARCMEYFDILRLVQALGIALLLGLLWWKSTINTEVQLRDQVGLMFYICIFWTSTCIFGAVYVFPFEKVYLRKERKADMYRLSVYYASSTLCDMMAHVMYPTIFMLIVYFMVGFKSTVACFFLTLFSVLLIAITSQGAGELFGAAVMSIERAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYMSFMYYGFRLLLKVQYSGEQLYECESYGGCRPLQSSPSFDTVNLKGGLSEVWVLLAMALCFRIMAYFCLRRRIDV 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00531 682 Gene3D - 98 325 IPR027417 -
Trre10g00531 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 323 IPR027417 -
Trre10g00531 682 Pfam ABC-2 type transporter 418 623 IPR013525 GO:0016020|GO:0140359
Trre10g00531 682 CDD ABCG_EPDR 66 312 - -
Trre10g00531 682 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 97 330 IPR003439 GO:0005524
Trre10g00531 682 Pfam ABC transporter 112 258 IPR003439 GO:0005524
Trre10g00531 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 671 - -
Trre10g00531 682 MobiDBLite consensus disorder prediction 1 23 - -
Trre10g00531 682 FunFam ABC transporter G family member 22 99 324 - -
Trre10g00531 682 SMART AAA_5 121 307 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00531 Trre-Chr10 3641378 3645166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00531 110 291 Calmodulin-binding Proteins AT2G36910 30.000 3.19e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00531 K05681 - gmx:100815259 1132.86