Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00529 ATGTCGGCTTACACAGACCAGGATCCCCGTCTTCACGGCATCAAAACTCAAATTCGTGTCGTCCCCAATTTTCCTAAATCCGGTATCATGTTCCAAGACATTACCACTCTCTTGCTGGATCCCAAAGCTTTTAAGGACACAATTGATTTGTTCGTTGAACGATATAAGGGAAAAAATATTTCTGTTGTTGCAGGAATCGAAGCTCGAGGATTTATTTTTGGTCCTCCCATTGCCCTGGCAATAGGAGCAAAGTTTGTACCCTTAAGGAAACCGAAGAAATTGCCTGGCAAAGTAATATCTCAAGAATATATTCTGGAATATGGAAGGGATTGTCTTGAGATGCATGTTGGAGCTGTTGAAGCTGGTGAACGTGCTATTGTGGTTGATGATTTGATTGCAACTGGTGGAACACTTGGTGCAGCTATGGATTTACTAGAACGTGTGGGAGCAGAGGTAGTAGAGTGTGCATGTGTCATTGAATTACCAGAACTTAAGGGTCGTGAACGTTTGAATGGGAAGCCCTTGTACGTCTTGGTGGAATACTTCGATATTTGA 555 0.427 MSAYTDQDPRLHGIKTQIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEAGERAIVVDDLIATGGTLGAAMDLLERVGAEVVECACVIELPELKGRERLNGKPLYVLVEYFDI 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00529 184 SUPERFAMILY PRTase-like 12 175 IPR029057 -
Trre10g00529 184 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Trre10g00529 184 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5 180 - -
Trre10g00529 184 Pfam Phosphoribosyl transferase domain 50 167 IPR000836 -
Trre10g00529 184 Gene3D - 2 181 IPR029057 -
Trre10g00529 184 CDD PRTases_typeI 48 180 IPR000836 -
Trre10g00529 184 FunFam Adenine phosphoribosyltransferase 1 2 181 - -
Trre10g00529 184 NCBIfam adenine phosphoribosyltransferase 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00529 Trre-Chr10 3615282 3622868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00529 1 180 PRT Gene Family AT1G27450 75.556 4.47e-97 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00529 K00759 - gmx:100306411 349.362