Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00515 ATGGCAGCTAGAGTGAGGGTTTCTTTACTGGTCCTCATGAGCCTTGTCACTTACATGTCTAGCACCGCAGAATCTTCTATAACCCCAGCAGAGTTCATTAAGTCTTCGTGCAGGGCTACTCGCTACCCTAATTTGTGTGTTCGATGTCTCATGAGGTATGCGAGCGTGATTGGCTTAAGTGAGCGACAACTAGCCATGACTGCTCTATCAGTGAGCATATCAAGGACACGATCGAGTGCATCATTTGTGAAGAAGATATCAAAAGCAAGAGGCATCAAACCAAGGGAGTATAGAGCCATACAAGACTGCATAGAAAACATGGATGACAGTTTGGACAGTCTAAGCCAATCGGTTAGGGAGTTAGGCAGTATTGGTCATGCTGTTGGAGAGGATTTCATGTGGCACATGAGCAACGTGCAAACATGGGTCAGTGCTGCTCTTACTGATGATAACACTTGTCTTGATGGCTTTGCTGGTCCTTCCATGAATGGAAATGTCAAGGCTTCCATCAAGAACAGAGTTGTCAATCTTACTCAAGTTACCAGCAACGCACTCGCTTTGGTCAATCGCTTAGCCTCGATTCATCATCAAACTGCTGAAACTCCTTAA 609 0.4532 MAARVRVSLLVLMSLVTYMSSTAESSITPAEFIKSSCRATRYPNLCVRCLMRYASVIGLSERQLAMTALSVSISRTRSSASFVKKISKARGIKPREYRAIQDCIENMDDSLDSLSQSVRELGSIGHAVGEDFMWHMSNVQTWVSAALTDDNTCLDGFAGPSMNGNVKASIKNRVVNLTQVTSNALALVNRLASIHHQTAETP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00515 202 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 192 IPR035513 -
Trre10g00515 202 NCBIfam pectinesterase inhibitor domain 8 191 IPR006501 GO:0004857
Trre10g00515 202 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 187 - -
Trre10g00515 202 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 192 IPR035513 -
Trre10g00515 202 CDD PMEI-like_3 35 193 - -
Trre10g00515 202 SMART PMEI_2 28 187 IPR006501 GO:0004857
Trre10g00515 202 FunFam Pectin methylesterase inhibitor 1 28 191 - -
Trre10g00515 202 Pfam Plant invertase/pectin methylesterase inhibitor 32 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00515 Trre-Chr10 3511325 3511933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00515 33 191 Carbohydrate Esterase AT3G14310 30.000 1.76e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00515 - - psat:127120659 314.309