Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00472 ATGATGAAAACCATCACAATGGAGCTTACATTGCTAGTTGGTCTCATTTTCATTCTCTGCAGCATAAGCCAAATTACATCAGTACTTGGTGCAGAGGATAATCAAGAACTTGATCACAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATATTGCTTCATTTCAATCGGAAGATTTGCATAAACGGTACTACCATTCATTCTTTCCACAAAGTTTTGCTCACAAAGAGAGAATGGTTTTCACTTATCGCAATGTCGCCTTTGGATTTGCTGTGAAGTTGACACCAGAAGAAGCCAAATCTCTTCAAGAGAAAGATGAAATTGTGTCAGCAAGACCAGAAAGGACACTTTCATTACACACAACTCATACTCCAACTTTCTTGGGGTTAAAACAAGGACAAGGATTGTGGAGCGACGATAACCTCGGAAAAGGTGTAATAATTGGACTCATAGACACAGGAATCTACCCTTTTCATCCATCATTCAATGATGAAGGAATGCCACCACCACCATCAAAATGGAAAGGCCATTGCGAATTCACTGGAGGAACGACATGCAACAATAAGCTCATAGGTGCGAGAAATTTAGTCAAAGGCGCAATTCAAGAGCCTCCATTTGAAGATATCTTCCATGGAACACACACTTCTGCAGAGGCTGCAGGAAGATTCATAGAAGATGCTCACATAGCAATGTACAAAGTTTGTAATGACAAACTAGGATGCCCCGAAAGTGCTATCTTAGCTGCAATGGATATAGCTATAGAAGATGGTGTAGATGTTCTTTCACTTTCACTTGGTTTAGGGTCTCTTTCATTTTATGAAGACCCAATTGCAATTGGTGCATTTGCTGCTACTCAAAATGGTGTTTTTGTTAGTTGCTCTGCTGCAAACGCTGGCCCTGGATACAGCACTCTCTCAAATGAAGCTCCTTGGATCCTCACAGTAGGTGCAAGCACAATTGACAGAAAAATTGTAGCATCAGCAAAACTAGGAAATGGAGACGAATTTGAAGGTGAAACATTATTCCAACCTAAAGACTTTTCTCAACAATTATTTCCACTTGTGTACGCAGGTTCGTATGGAGACAAGACACAGAATCAGTCTTGGTGTCTACCAGGTTCCTTAAAGAACATTGATCTAAGTGGAAAAATAGTGTTGTGTGACATAGGAGGACATGTTACAAGTGATGTGAAAGGACAAGAAGTTCTAAATGCGAATGGTGTAGGAATGATCCTTGCAAACCCTGTAGAACTCGGTTTCACCACTTATGTTCTTGCGGATGTTTTACCTGCTGTTGAAGTGAGTTATGCCGCTGGTTTAACAATCAAAGATTACATAAACTTAACACACAATCCAACAGCAACAATACTATTCAAAGGAACAGTAATTGGTGATTCTTTAGCTCCTTCAGTTGCTTCATTTTCTTCAAGAGGACCAAGCCAAGAAAGTGCTGGAATTCTAAAACCAGACATCATAGGACCAGGTGTCAACATTCTAGCTGCTTGGGCTGTTTCTGTAGACAACAAACTCCCGCCTTATAATATTATTTCTGGTACTTCAATGTCTTGTCCTCATCTTAGTGGTATTGCTGCATTGATTAAAAGCTCTCACCCTGATTGGTCGCCAGCCGCCATAAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTTGGCGGGAATCCTATAACGGATGAAAGACATTTACCTGCTGATGTTTTCGCTACTGGTGCAGGACATGTTAATCCTGTTAAAGCAAATGATCCTGGTCTTATTTATGATATTCAACCTGAAGATTATGTTCCTTATTTGTGTGGTTTGGGTTATTCTGATAAAGAGATTGAAGTTATTGTTCAGTGGAAAGTGAATTGTTCTGATGTGAAAAGTATACCAGGAGCACAACTGAACTATCCATCTTTTTCGATTCTGTTAGGGTCTGAATCACAGTTATATACAAGAACTTTGACTAATGTTGGACCAGTAAATGCAACATATAGAGTTGAACTTGAAGTGCCTCTGGCTTTAGATATGAGTGTTAATCCTAGTGTGATATCATTTAGTGAGATTAATGAGAAGATTAGTTACTCGGTGGATTTTTTACCGCAAGCTAAGGAAAATCAAGGTATCCATATTTTTGCTCATGGTTCTCTCACTTGGAGATCTGATAAACATGCTGTTAGGGTACCTATATCTGTGACTTTCAAGTGA 2214 0.3921 MMKTITMELTLLVGLIFILCSISQITSVLGAEDNQELDHNLMTYIVHVKKSENIASFQSEDLHKRYYHSFFPQSFAHKERMVFTYRNVAFGFAVKLTPEEAKSLQEKDEIVSARPERTLSLHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGLIDTGIYPFHPSFNDEGMPPPPSKWKGHCEFTGGTTCNNKLIGARNLVKGAIQEPPFEDIFHGTHTSAEAAGRFIEDAHIAMYKVCNDKLGCPESAILAAMDIAIEDGVDVLSLSLGLGSLSFYEDPIAIGAFAATQNGVFVSCSAANAGPGYSTLSNEAPWILTVGASTIDRKIVASAKLGNGDEFEGETLFQPKDFSQQLFPLVYAGSYGDKTQNQSWCLPGSLKNIDLSGKIVLCDIGGHVTSDVKGQEVLNANGVGMILANPVELGFTTYVLADVLPAVEVSYAAGLTIKDYINLTHNPTATILFKGTVIGDSLAPSVASFSSRGPSQESAGILKPDIIGPGVNILAAWAVSVDNKLPPYNIISGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGNPITDERHLPADVFATGAGHVNPVKANDPGLIYDIQPEDYVPYLCGLGYSDKEIEVIVQWKVNCSDVKSIPGAQLNYPSFSILLGSESQLYTRTLTNVGPVNATYRVELEVPLALDMSVNPSVISFSEINEKISYSVDFLPQAKENQGIHIFAHGSLTWRSDKHAVRVPISVTFK 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00472 737 FunFam subtilisin-like protease SBT1.5 323 465 - -
Trre10g00472 737 PRINTS Subtilisin serine protease family (S8) signature 519 535 IPR015500 -
Trre10g00472 737 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Trre10g00472 737 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Trre10g00472 737 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 734 IPR045051 -
Trre10g00472 737 CDD Peptidases_S8_3 121 556 IPR034197 -
Trre10g00472 737 ProSiteProfiles Serine proteases, subtilase domain profile. 129 589 - -
Trre10g00472 737 Gene3D - 606 736 - -
Trre10g00472 737 SUPERFAMILY Subtilisin-like 121 593 IPR036852 GO:0004252|GO:0006508
Trre10g00472 737 CDD PA_subtilisin_like 331 458 - -
Trre10g00472 737 Gene3D - 323 466 - -
Trre10g00472 737 Pfam Fibronectin type-III domain 636 734 IPR041469 -
Trre10g00472 737 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 122 IPR037045 -
Trre10g00472 737 Pfam Subtilase family 145 562 IPR000209 GO:0006508|GO:0008236
Trre10g00472 737 Pfam PA domain 355 443 IPR003137 -
Trre10g00472 737 Gene3D Peptidase S8/S53 domain 147 602 IPR036852 GO:0004252|GO:0006508
Trre10g00472 737 Pfam Peptidase inhibitor I9 43 122 IPR010259 -
Trre10g00472 737 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 150 161 IPR023827 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00472 Trre-Chr10 3159360 3161573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00472 43 736 Subtilisin-like Serine Gene Family AT5G67360 44.580 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00472 - - gmx:100783595 1083.55